<ttd>
	<tool status="external">
		<category>does not really matter</category>
		<type>Rscript_qcfigures_rt_acc</type>
		<external>
				<text>
					<onstartup>Calling Rscript rt acc ...</onstartup>
					<onfail>Something went wrong. Is 'R' in your PATH?</onfail>
					<onfinish>Tool finished successfully.</onfinish>
				</text>
			<e_category>FileConversion</e_category>
			<cloptions>--vanilla "%1/ProduceQCFigures_rt_acc.R" "%2" "%3"</cloptions>
			<path>Rscript</path>
			<mappings>
				<mapping id="1" cl="%%scriptpath" />
				<mapping id="2" cl="%%inTSVacc" />
				<mapping id="3" cl="%TMP/%BASENAME[%%inTSVacc]_acc_time.png" />
				<file_post location="%TMP/%BASENAME[%%inTSVacc]_acc_time.png" target="out" />
			</mappings>
			<ini_param>
				<ITEM name="scriptpath" value="." type="string" description="input script path, this should point
to share/OpenMS/SCRIPTS of your OpenMS installation"/>
				<ITEM name="inTSVacc" value="" type="string" description="tabular input data for accuracy stats(valid formats:
&apos;unknown,tsv&apos;)" tags="input file" />
				<ITEM name="out" value="" type="string" description="output figure from R(valid formats:
&apos;png&apos;)" tags="output file" />
			</ini_param>
		</external>
	</tool>
</ttd>
