Metadata-Version: 1.1
Name: mzOS
Version: 0.1.3
Summary: Heuristic based feature annotations/identifications of LC-MS metabolomics dataset.
Home-page: http://github.com/jerkos/mzOS
Author: Marco Dubois
Author-email: cram@hotmail.fr
License: MIT
Description: mzOS
        ====
        
        [![Build Status](https://travis-ci.org/jerkos/mzOS.svg?branch=master)](https://travis-ci.org/jerkos/mzOS)
        [![Coverage Status](https://coveralls.io/repos/jerkos/mzOS/badge.svg?branch=master&service=github)](https://coveralls.io/github/jerkos/mzOS?branch=master)
        [![Code Issues](https://www.quantifiedcode.com/api/v1/project/f458ff06e0bd4eb8b2b98cee0dab6ecb/badge.svg)](https://www.quantifiedcode.com/app/project/f458ff06e0bd4eb8b2b98cee0dab6ecb)
        
        ## Small library for features annotations in  LC-MS metabolomics experiments:
        
        * [x] isotopes detection
        * [x] adducts/fragments annotation using simple heuristics (when conflicts)
        * [x] database search (HMDB, LMSD) from local sqlite file (fast)
        * [x] database assignment scoring based on predicted isotopic distribution and bayesian algorithm. 
        * [ ] functionnal annotation, metabolite pathway enrichment analysis (MPEA)
        
        More details [here](http://jerkos.github.io/mzOS)
        
        ## Dependancies
        
        * numpy
        * scipy
        * scikit-learn
        * pandas
        
        ## TODOs:
        
        * documentation
        
Platform: UNKNOWN
Classifier: Development Status :: 3 - Alpha
Classifier: License :: OSI Approved :: MIT License
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Requires: bioservices
Requires: scipy
Requires: numpy
Requires: six
Requires: sklearn
Requires: pandas
