Metadata-Version: 1.1
Name: csb
Version: 1.2.5
Summary: Computational Structural Biology Toolbox
Home-page: http://github.com/csb-toolbox
Author: Michael Habeck et al.
Author-email: ivan.kalev@gmail.com
License: MIT
Description: Computational Structural Biology Toolbox
        ========================================
        
        CSB is a python library and application framework, which can be used
        to solve problems in the field of structural bioinformatics. If
        you are a bioinformatician, software engineer or a researcher working
        in this field, chances are you may find something useful here. Our
        package consists of a few major components:
        
        1. Core class library - object-oriented, granular, with an emphasis
           on design and clean interfaces.
        
        2. Application framework - console applications ("protocols"),
           which consume objects from the core library in order to build
           something executable (and hopefully useful).
        
        3. Test framework - ensures that the library *actually* works.
        
        
        Installation 
        ------------
        CSB is being developed on Linux with Python 2.7 and 3.6. However, compatibility
        is a design goal and the package works on any platform, on any modern Python
        interpreter since version 2.6 (that includes python 3 support out of
        the box). If you find any issues on a platform/interpreter different from
        our development environment, please let us know.
        
        CSB and all of its dependencies can be installed with pip::
        
            $ pip install csb
        
        See http://csb-toolbox.github.io/Installation for more details.
        
        
        Running CSB Applications
        ------------------------
        
        CSB is bundled with a number of executable console csb.apps. Each app
        provides a standard command line interface. To run any app, try::
        
            $ csb-app --help
            
        where *csb-app* is the name of the application, such as ``csb-hhfrag``.
        For more details on our app framework, including guidelines for writing new
        applications, please refer to the API documentation, package "csb.apps".
        
        
        Documentation
        -------------
        
        The project's web site at `GitHub <http://github.com/csb-toolbox>`_ contains
        online documentation and samples. Visit us at:
            
        http://csb-toolbox.github.io
        
        Detailed API documentation can be found in the "docs/api" directory in the
        distribution package (docs/api/index.html). This documentaiton is also hosted
        on our web site:
        
        https://csb-toolbox.github.io/api-docs/
        
        Many packages contain introductory module level documentation and samples/tutorials.
        These are also available in the HTML docs, but a quick way to access them is by using
        the built-in python help system. For example, for a general introduction
        see the module documentation of the root package::
        
            $ python -c "import csb; help(csb)"
        
        If you are interested in a specific package, such as cs.bio.sequence,
        try::    
            
            $ python -c "import csb.bio.sequence; help(csb.bio.sequence)"
        
        
        Contact
        -------
        
        CSB is developed by Michael Habeck's Computational Structural Biology
        `research group <http://www.stochastik.math.uni-goettingen.de/index.php?id=172>`_.
            
        For complete source code, contributions, support or bug reports please visit
        us on GitHub:
          
        http://github.com/csb-toolbox/
            
        
        License
        -------
        
        CSB is open source and distributed under OSI-approved MIT license.
        ::
        
            Copyright (c) 2012 Michael Habeck
            
            Permission is hereby granted, free of charge, to any person obtaining
            a copy of this software and associated documentation files (the
            "Software"), to deal in the Software without restriction, including
            without limitation the rights to use, copy, modify, merge, publish,
            distribute, sublicense, and/or sell copies of the Software, and to
            permit persons to whom the Software is furnished to do so, subject to
            the following conditions:
            
            The above copyright notice and this permission notice shall be
            included in all copies or substantial portions of the Software.
            
            THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
            EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
            MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.
            IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY
            CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT,
            TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE
            SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
            
        
        
        .. image:: https://travis-ci.org/csb-toolbox/CSB.svg?branch=master
           :target: https://travis-ci.org/csb-toolbox
        
Platform: UNKNOWN
Classifier: Development Status :: 5 - Production/Stable
Classifier: Intended Audience :: Developers
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: MIT License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.1
Classifier: Programming Language :: Python :: 3.2
Classifier: Programming Language :: Python :: 3.3
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Classifier: Programming Language :: Python :: 3.6
Classifier: Topic :: Scientific/Engineering
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
Classifier: Topic :: Scientific/Engineering :: Mathematics
Classifier: Topic :: Scientific/Engineering :: Physics
Classifier: Topic :: Software Development :: Libraries
