{ "info": { "author": "Jeremy Jacobs", "author_email": "pub@j4c0bs.net", "bugtrack_url": null, "classifiers": [ "Environment :: Console", "Intended Audience :: Developers", "Intended Audience :: End Users/Desktop", "Intended Audience :: Science/Research", "License :: OSI Approved :: BSD License", "Operating System :: OS Independent", "Programming Language :: Python :: 3.5", "Programming Language :: Python :: 3.6", "Topic :: Scientific/Engineering", "Topic :: Scientific/Engineering :: Bio-Informatics", "Topic :: Utilities" ], "description": "xfcs\n=======\nExtract metadata and data from FCS (3.0, 3.1) files.\n\nData extraction supports file formats:\n - Mode: List (L)\n - Datatypes: I, F, D\n\nImplemented parameter data set options:\n - raw\n - channel values\n - scale values (log10, gain)\n - channel and scale combined into one data set\n - fluorescence compensation\n - log10 scaled fluorescence compensation\n\nMetadata extraction features:\n - support for non-compliant files\n - merge or separate csv files\n - rolling mean for any keyword with a numeric value\n - append new fcs files to previously generated metadata csv file\n\n\nInteractive dashboard plots using the `xfcsdashboard `_ add-on module.\n .. image:: docs/dashboard_preview.png\n\n\nInstallation\n------------\n\nUsing pip:\n\n::\n\n pip install xfcs\n\nWithout pip:\n\n::\n\n python setup.py install\n\nCommand Line Usage\n------------------\n\nSee\n`USAGE `_\nfor expanded details.\n\nTo see a list of available commands and arguments, run ''xfcs data --help'' or ''xfcs metadata --help''\n\n::\n\n extract data: xfcs data [options]\n extract metadata: xfcs metadata [options]\n\nRequirements\n------------\n\n- Python 3.5 or greater\n- numpy\n- pandas\n\nLicense\n-------\n\nxfcs is released under the BSD 2-clause license. See\n`LICENSE `_\nfor details.", "description_content_type": null, "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/j4c0bs/xfcs", "keywords": "FCS FCS3.0 FCS3.1 flow cytometry", "license": "BSD", "maintainer": "", "maintainer_email": "", "name": "xfcs", "package_url": "https://pypi.org/project/xfcs/", "platform": "", "project_url": "https://pypi.org/project/xfcs/", "project_urls": { "Homepage": "https://github.com/j4c0bs/xfcs" }, "release_url": "https://pypi.org/project/xfcs/1.1.6/", "requires_dist": null, "requires_python": ">3.5", "summary": "Extract Flow Cytometry data from FCS files version 3+.", "version": "1.1.6" }, "last_serial": 3082222, "releases": { "1.1.5": [ { "comment_text": "", "digests": { "md5": "c137429b44d691d15ff3adfe573ec230", "sha256": "d661c2cbcedc0755d5554cc83eeae79a409d4191953bc65a8fc6353d681e5613" }, "downloads": -1, "filename": "xfcs-1.1.5.tar.gz", "has_sig": true, "md5_digest": "c137429b44d691d15ff3adfe573ec230", "packagetype": "sdist", "python_version": "source", "requires_python": ">3.5", "size": 27528, "upload_time": "2017-08-02T08:32:53", "url": "https://files.pythonhosted.org/packages/4d/20/845c30977c71d676c7b06f5742dfd0fe2141429dca32df11d5b628e22b66/xfcs-1.1.5.tar.gz" } ], "1.1.6": [ { "comment_text": "", "digests": { "md5": "5fb06ff259b20d17a0cf3321ef786e1e", "sha256": "bdc59b4a7f96a0781e4b38bd5660d448c5b3d0d8a8a836c4255868036d48cced" }, "downloads": -1, "filename": "xfcs-1.1.6.tar.gz", "has_sig": true, "md5_digest": "5fb06ff259b20d17a0cf3321ef786e1e", "packagetype": "sdist", "python_version": "source", "requires_python": ">3.5", "size": 142800, "upload_time": "2017-08-08T20:02:38", "url": "https://files.pythonhosted.org/packages/6c/89/84b88f0c5cf55d333144021b61c3564f1a96533d36fd9b8fa600f831dbb5/xfcs-1.1.6.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "5fb06ff259b20d17a0cf3321ef786e1e", "sha256": "bdc59b4a7f96a0781e4b38bd5660d448c5b3d0d8a8a836c4255868036d48cced" }, "downloads": -1, "filename": "xfcs-1.1.6.tar.gz", "has_sig": true, "md5_digest": "5fb06ff259b20d17a0cf3321ef786e1e", "packagetype": "sdist", "python_version": "source", "requires_python": ">3.5", "size": 142800, "upload_time": "2017-08-08T20:02:38", "url": "https://files.pythonhosted.org/packages/6c/89/84b88f0c5cf55d333144021b61c3564f1a96533d36fd9b8fa600f831dbb5/xfcs-1.1.6.tar.gz" } ] }