{ "info": { "author": "Forest Dussault", "author_email": "forest.dussault@canada.ca", "bugtrack_url": null, "classifiers": [], "description": "# vfdbQuery\n\n### Requirements\n- Python 3.6\n- [ncbi-blast+](https://blast.ncbi.nlm.nih.gov/Blast.cgi?PAGE_TYPE=BlastDocs&DOC_TYPE=Download) (makeblastdb and blastn must be in your $PATH)\n\n### Installation\n```\npip install vfdbQuery\n```\n\n### Usage\n```\nUsage: vfdbQuery [OPTIONS]\n\n vfdbQuery is a simple script for querying an input genome assembly against\n the Virulence Factor Database (VFDB).\n\nOptions:\n -i, --infile PATH FASTA file that you want to search against VFDB\n [required]\n -db, --database PATH Path to Virulence Factor Database (VFDB) [required]\n --help Show this message and exit.\n\n```", "description_content_type": "text/markdown", "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/bfssi-forest-dussault/vfdbQuery", "keywords": "", 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