{ "info": { "author": "Jeremy McRae", "author_email": "jmcrae@illumina.com", "bugtrack_url": null, "classifiers": [ "Development Status :: 3 - Alpha", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "## vcfsyncer: A package to synchronize multiple VCFs\nThis is a way to transparently use single sample VCFs as if they were a\nmulti-sample VCF.\n\n### Installation\nThe simplest way to install vcfsyncer is through pip:\n```sh\npip install vcfsyncer\n```\n\n### Usage\nUse vcfsyncer within a python environment\n```python\n\nfrom vcfsyncer import VCFSyncer\n\nsynced = VCFSyncer(PATH_A, PATH_B, PATH_C)\n\n# you can iterate through the synchronized VCFs\nfor var in synced:\n print(var.chrom, var.pos)\n\n# alternatively, fetch regions from the synchronized VCFs (if tabix-indexed)\nfor var in synced.fetch(chrom='1', start=1000000, end=2000000):\n print(var.chrom, var.pos)\n```", "description_content_type": "text/markdown", "docs_url": null, "download_url": "", "downloads": 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