{
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        "author": "",
        "author_email": "David Nicholson <nickledave@users.noreply.github.com>",
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            "Development Status :: 5 - Production/Stable",
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            "Programming Language :: Python",
            "Programming Language :: Python :: 3",
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        "description": "[![DOI](https://zenodo.org/badge/173566541.svg)](https://zenodo.org/badge/latestdoi/173566541)\n<!-- ALL-CONTRIBUTORS-BADGE:START - Do not remove or modify this section -->\n[![All Contributors](https://img.shields.io/badge/all_contributors-9-orange.svg?style=flat-square)](#contributors-)\n<!-- ALL-CONTRIBUTORS-BADGE:END -->\n[![PyPI version](https://badge.fury.io/py/vak.svg)](https://badge.fury.io/py/vak)\n[![License](https://img.shields.io/badge/License-BSD%203--Clause-blue.svg)](https://opensource.org/licenses/BSD-3-Clause)\n[![Build Status](https://github.com/NickleDave/vak/actions/workflows/ci-linux.yml/badge.svg)](https://github.com/NickleDave/vak/actions/workflows/ci-linux.yml/badge.svg)\n[![Build Status](https://github.com/NickleDave/vak/actions/workflows/ci-macos.yml/badge.svg)](https://github.com/NickleDave/vak/actions/workflows/ci-macos.yml/badge.svg)\n[![codecov](https://codecov.io/gh/NickleDave/vak/branch/main/graph/badge.svg?token=9Y4XXB2ELA)](https://codecov.io/gh/NickleDave/vak)\n# vak\n## a neural network toolbox for animal vocalizations and bioacoustics\n\n`vak` is a library for researchers studying animal vocalizations--such as \nbirdsong, bat calls, and even human speech--although it may be useful \nto anyone working with bioacoustics data. \n\nThe library has two main goals:  \n1. make it easier for researchers studying animal vocalizations to \napply neural network algorithms to their data\n2. provide a common framework that will facilitate benchmarking neural \nnetwork algorithms on tasks related to animal vocalizations\n\nCurrently the main use is automated **annotation** of vocalizations and other animal sounds.\nBy **annotation**, we mean something like the example of annotated birdsong shown below:  \n<p align=\"center\">\"<img src=\"./doc/images/annotation-example.png\" alt=\"spectrogram of birdsong with syllables annotated\" width=\"400\"></p>\n\nYou give `vak` training data in the form of audio or spectrogram files with annotations, \nand then `vak` helps you train neural network models \nand use the trained models to predict annotations for new files.\n\nWe developed `vak` to benchmark a neural network model we call [`tweetynet`](https://github.com/yardencsGitHub/tweetynet).  \nPlease see the eLife article here: https://elifesciences.org/articles/63853  \n\n### Installation\nShort version:\n\n#### with `pip`\n\n```console\n$ pip install vak\n```\n\n#### with `conda`\n##### on Mac and Linux\n\n```console\n$ conda install vak -c conda-forge\n```\n\n##### on Windows\nOn Windows, you need to add an additional channel, `pytorch`.  \nYou can do this by repeating the `-c` option more than once.\n```console\n$ conda install vak -c conda-forge -c pytorch\n$ #                                 ^ notice additional channel!\n```\n\nFor more details, please see:\nhttps://vak.readthedocs.io/en/latest/get_started/installation.html\n\nWe test `vak` on Ubuntu and MacOS. We have run on Windows and \nknow of other users successfully running `vak` on that operating system, \nbut installation on Windows may require some troubleshooting.\nA good place to start is by searching the [issues](https://github.com/NickleDave/vak/issues).\n\n### Usage\n#### Tutorial\nCurrently the easiest way to work with `vak` is through the command line.\n![terminal showing vak help command output](./doc/images/terminalizer/vak-help.gif)\n\nYou run it with configuration files, using one of a handful of commands.\n\nFor more details, please see the \"autoannotate\" tutorial here:  \nhttps://vak.readthedocs.io/en/latest/tutorial/autoannotate.html\n\n#### How can I use my data with `vak`?\n\nPlease see the How-To Guides in the documentation here:\nhttps://vak.readthedocs.io/en/latest/howto/howto.html\n\n### Support / Contributing\nWe handle support through the issue tracker on GitHub:  \nhttps://github.com/NickleDave/vak/issues  \nPlease raise an issue there if you run into trouble.  \nThat would be a great place to start if you are interested in contributing, as well.\n\n### Citation\nIf you use vak for a publication, please cite its DOI:  \n[![DOI](https://zenodo.org/badge/173566541.svg)](https://zenodo.org/badge/latestdoi/173566541)\n\n### License\n[![License](https://img.shields.io/badge/License-BSD%203--Clause-blue.svg)](https://opensource.org/licenses/BSD-3-Clause)  \nis [here](./LICENSE).\n\n### About\nFor more on the history of `vak` please see: https://vak.readthedocs.io/en/latest/reference/about.html\n\n#### \"Why this name, vak?\"\nIt has only three letters, so it is quick to type,\nand it wasn't taken on [pypi](https://pypi.org/) yet.\nAlso I guess it has [something to do with speech](https://en.wikipedia.org/wiki/V%C4%81c).\n\"vak\" rhymes with \"squawk\" and \"talk\".\n\n#### Does your library have any poems?\n[Yes.](https://vak.readthedocs.io/en/latest/poems/index.html)\n\n## Contributors \u2728\n\nThanks goes to these wonderful people ([emoji key](https://allcontributors.org/docs/en/emoji-key)):\n\n<!-- ALL-CONTRIBUTORS-LIST:START - Do not remove or modify this section -->\n<!-- prettier-ignore-start -->\n<!-- markdownlint-disable -->\n<table>\n  <tr>\n    <td align=\"center\"><a href=\"https://github.com/avanikop\"><img src=\"https://avatars.githubusercontent.com/u/39831515?v=4?s=100\" width=\"100px;\" alt=\"\"/><br /><sub><b>avanikop</b></sub></a><br /><a href=\"https://github.com/NickleDave/vak/issues?q=author%3Aavanikop\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n    <td align=\"center\"><a href=\"http://www.lukepoeppel.com\"><img src=\"https://avatars.githubusercontent.com/u/20927930?v=4?s=100\" width=\"100px;\" alt=\"\"/><br /><sub><b>Luke Poeppel</b></sub></a><br /><a href=\"https://github.com/NickleDave/vak/commits?author=Luke-Poeppel\" title=\"Documentation\">\ud83d\udcd6</a></td>\n    <td align=\"center\"><a href=\"https://yardencsgithub.github.io/\"><img src=\"https://avatars.githubusercontent.com/u/17324841?v=4?s=100\" width=\"100px;\" alt=\"\"/><br /><sub><b>yardencsGitHub</b></sub></a><br /><a href=\"https://github.com/NickleDave/vak/commits?author=yardencsGitHub\" title=\"Code\">\ud83d\udcbb</a> <a href=\"#ideas-yardencsGitHub\" title=\"Ideas, Planning, & Feedback\">\ud83e\udd14</a> <a href=\"#talk-yardencsGitHub\" title=\"Talks\">\ud83d\udce2</a> <a href=\"#userTesting-yardencsGitHub\" title=\"User Testing\">\ud83d\udcd3</a> <a href=\"#question-yardencsGitHub\" title=\"Answering Questions\">\ud83d\udcac</a></td>\n    <td align=\"center\"><a href=\"https://nicholdav.info/\"><img src=\"https://avatars.githubusercontent.com/u/11934090?v=4?s=100\" width=\"100px;\" alt=\"\"/><br /><sub><b>David Nicholson</b></sub></a><br /><a href=\"https://github.com/NickleDave/vak/issues?q=author%3ANickleDave\" title=\"Bug reports\">\ud83d\udc1b</a> <a href=\"https://github.com/NickleDave/vak/commits?author=NickleDave\" title=\"Code\">\ud83d\udcbb</a> <a href=\"#data-NickleDave\" title=\"Data\">\ud83d\udd23</a> <a href=\"https://github.com/NickleDave/vak/commits?author=NickleDave\" title=\"Documentation\">\ud83d\udcd6</a> <a href=\"#example-NickleDave\" title=\"Examples\">\ud83d\udca1</a> <a href=\"#ideas-NickleDave\" title=\"Ideas, Planning, & Feedback\">\ud83e\udd14</a> <a href=\"#infra-NickleDave\" title=\"Infrastructure (Hosting, Build-Tools, etc)\">\ud83d\ude87</a> <a href=\"#maintenance-NickleDave\" title=\"Maintenance\">\ud83d\udea7</a> <a href=\"#mentoring-NickleDave\" title=\"Mentoring\">\ud83e\uddd1\u200d\ud83c\udfeb</a> <a href=\"#projectManagement-NickleDave\" title=\"Project Management\">\ud83d\udcc6</a> <a href=\"https://github.com/NickleDave/vak/pulls?q=is%3Apr+reviewed-by%3ANickleDave\" title=\"Reviewed Pull Requests\">\ud83d\udc40</a> <a href=\"#question-NickleDave\" title=\"Answering Questions\">\ud83d\udcac</a> <a href=\"#talk-NickleDave\" title=\"Talks\">\ud83d\udce2</a> <a href=\"https://github.com/NickleDave/vak/commits?author=NickleDave\" title=\"Tests\">\u26a0\ufe0f</a> <a href=\"#tutorial-NickleDave\" title=\"Tutorials\">\u2705</a></td>\n    <td align=\"center\"><a href=\"https://github.com/marichard123\"><img src=\"https://avatars.githubusercontent.com/u/30010668?v=4?s=100\" width=\"100px;\" alt=\"\"/><br /><sub><b>marichard123</b></sub></a><br /><a href=\"https://github.com/NickleDave/vak/commits?author=marichard123\" title=\"Documentation\">\ud83d\udcd6</a></td>\n    <td align=\"center\"><a href=\"https://www.utsouthwestern.edu/labs/roberts/\"><img src=\"https://avatars.githubusercontent.com/u/46657075?v=4?s=100\" width=\"100px;\" alt=\"\"/><br /><sub><b>Therese Koch</b></sub></a><br /><a href=\"https://github.com/NickleDave/vak/commits?author=theresekoch\" title=\"Documentation\">\ud83d\udcd6</a> <a href=\"https://github.com/NickleDave/vak/issues?q=author%3Atheresekoch\" title=\"Bug reports\">\ud83d\udc1b</a></td>\n    <td align=\"center\"><a href=\"https://github.com/alyndanoel\"><img src=\"https://avatars.githubusercontent.com/u/48728732?v=4?s=100\" width=\"100px;\" alt=\"\"/><br /><sub><b>alyndanoel</b></sub></a><br /><a href=\"#ideas-alyndanoel\" title=\"Ideas, Planning, & Feedback\">\ud83e\udd14</a></td>\n  </tr>\n  <tr>\n    <td align=\"center\"><a href=\"https://github.com/adamfishbein\"><img src=\"https://avatars.githubusercontent.com/u/70346566?v=4?s=100\" width=\"100px;\" alt=\"\"/><br /><sub><b>adamfishbein</b></sub></a><br /><a href=\"https://github.com/NickleDave/vak/commits?author=adamfishbein\" title=\"Documentation\">\ud83d\udcd6</a></td>\n    <td align=\"center\"><a href=\"https://github.com/vivinastase\"><img src=\"https://avatars.githubusercontent.com/u/25927299?v=4?s=100\" width=\"100px;\" alt=\"\"/><br /><sub><b>vivinastase</b></sub></a><br /><a href=\"https://github.com/NickleDave/vak/issues?q=author%3Avivinastase\" title=\"Bug reports\">\ud83d\udc1b</a> <a href=\"#userTesting-vivinastase\" title=\"User Testing\">\ud83d\udcd3</a></td>\n  </tr>\n</table>\n\n<!-- markdownlint-restore -->\n<!-- prettier-ignore-end -->\n\n<!-- ALL-CONTRIBUTORS-LIST:END -->\n\nThis project follows the [all-contributors](https://github.com/all-contributors/all-contributors) specification. 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