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        "author": "Taylor Steinberg",
        "author_email": "taylor.steinberg@lifeomic.com",
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        "classifiers": [
            "Development Status :: 3 - Alpha",
            "Intended Audience :: Developers",
            "Intended Audience :: Healthcare Industry",
            "License :: OSI Approved :: MIT License",
            "Natural Language :: English",
            "Programming Language :: Python",
            "Programming Language :: Python :: 3",
            "Programming Language :: Python :: 3.7",
            "Topic :: Utilities"
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        "description": "![GitHub](https://img.shields.io/github/license/lifeomic/termlink.svg?style=for-the-badge)\n![Travis (.org) branch](https://img.shields.io/travis/lifeomic/termlink/master.svg?style=for-the-badge)\n![PyPI status](https://img.shields.io/pypi/status/termlink.svg?style=for-the-badge)\n![GitHub release](https://img.shields.io/github/release/lifeomic/termlink.svg?style=for-the-badge)\n\n# TermLink\n\nPrepare an ontology and send it to the Precision Health Cloud.\n\n_Termlink_ is a command line client and library for uploading ontologies to LifeOmic's _Precision Health Cloud_. Its goal is to make uploading standardized ontologies easier and to provide utilities for uploading custom ontologies. It provides a simple command line interface for creating standard ontologies and a Python SDK for building integrations with custom ontologies.\n\n## Quickstart\n\nDownload the following tools:\n\n- [Docker](https://docs.docker.com/install/)\n\nPull the latest version of _TermLink_ from [Docker Hub](https://hub.docker.com/r/lifeomic/termlink):\n\n```sh\ndocker pull lifeomic/termlink\n```\n\nRun it.\n\n```sh\ndocker run lifeomic/termlink --help\n```\n\nImport the output ontology into the [Precision Health Cloud](https://lifeomic.com/products/) using the [LifeOmic CLI](https://github.com/lifeomic/cli):\n\n```sh\ndocker run lifeomic/termlink ... | lo ontologies import <project>\n```\n\n## Getting Started\n\nThese instructions will get you a copy of the project up and running on your local machine for development and testing purposes. See deployment for notes on how to deploy the project on a live system.\n\n### Prerequisites\n\nThe following tools are required to run _TermLink_:\n\n- [Docker](https://docs.docker.com/install/)\n- [Git](https://git-scm.com/)\n- [Python 3](https://www.python.org/download/releases/3.0/)\n- [Yarn](https://yarnpkg.com/en/)\n\n### Installing\n\nThe following steps will guide you through installing the project locally.\n\nClone the `git` repository onto your local machine.\n\n```sh\ngit clone git@github.com:lifeomic/termlink.git && cd ./termlink\n```\n\nUsing Python 3, create a `virtualenv` and then activate it.\n\n```sh\npython3 -m venv venv && source venv/bin/activate\n```\n\n_Note: Your Python binary may be under a different name._\n\nCheck that your local version of Python is at least version 3.7 by running `python --version`.\n\nOnce you have verified your version of Python is correct, run the following to download all dependencies.\n\n```sh\npip install -r requirements.txt\n```\n\n```sh\npip install -r requirements-dev.txt\n```\n\nYou now have everything you need to start developing on _Termlink_. \n\n## Testing\n\nThis project uses the Python [`nose`](https://nose.readthedocs.io/en/latest/index.html) framework.\n\n### Unit Testing\n\nRun unit tests with `yarn`:\n\n```sh\nyarn test\n```\n\nTest coverage is enforced using the `coverage.py` module. Inspect the test \ncoverage with:\n\n```sh\nyarn inspect\n```\n\n## Deployment\n\nTermLink is published on:\n\n- [PyPI](https://pypi.org/project/termlink/): Python package.\n- [Docker Hub](https://hub.docker.com/r/lifeomic/termlink): Packaged runtime environment.\n- [GitHub](https://github.com/lifeomic/termlink/releases): Python package and source files.\n\nDocumentation is published on [GitHub Pages](https://lifeomic.github.io/termlink/).\n\nTo publish a new version run the following command:\n\n```sh\nyarn version\n```\n\nYou will be promoted to enter a new version. Please use [SemVer](https://semver.org/) versioning for incrementing versions. To learn more about why SemVer is used, see the section on [_Versioning_](##Versioning) below.\n\nThis will trigger the deployment pipeline on `Travis CI`.\n\n## Built With\n\n- [Docker](https://www.docker.com/): \"Build, Ship, and Run Any App, Anywhere.\"\n- [Python 3](https://www.python.org/): \"Python is a programming language that lets you work quickly and integrate systems more effectively.\"\n- [Requests](http://docs.python-requests.org/en/master/): \"Requests is an elegant and simple HTTP library for Python, built for human beings.\"\n\n## Contributing\n\n[TODO]\n\n## Versioning\n\nWe use [SemVer](http://semver.org/) for versioning. For the versions available, see the [tags on this repository](https://github.com/your/project/tags). \n\nThe following guidelines are provided on the [SemVer]((http://semver.org/)) website:\n\n> Given a version number MAJOR.MINOR.PATCH, increment the:\n>\n> - MAJOR version when you make incompatible API changes,\n> - MINOR version when you add functionality in a backwards-compatible manner, and\n> - PATCH version when you make backwards-compatible bug fixes.\n>\n> Additional labels for pre-release and build metadata are available as extensions to the MAJOR.MINOR.PATCH format.\n\n## Authors\n\n- **Taylor Steinberg** - *Initial work* - [tdstein](https://github.com/tdstein)\n\nSee also the list of [contributors](https://github.com/lifeomic/termlink/contributors) who participated in this project.\n\n## License\n\nThis project is licensed under the MIT - see the [LICENSE](LICENSE.txt) file for details.\n\n## Acknowledgments\n\n[TODO]",
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