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        "author_email": "miyamoto@brain.imi.i.u-tokyo.ac.jp",
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            "License :: OSI Approved :: Apache Software License",
            "Operating System :: OS Independent",
            "Programming Language :: Python",
            "Programming Language :: Python :: 2.7",
            "Programming Language :: Python :: 3",
            "Programming Language :: Python :: 3.3",
            "Programming Language :: Python :: 3.4",
            "Topic :: Scientific/Engineering :: Medical Science Apps.",
            "Topic :: Scientific/Engineering :: Visualization"
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        "description": "swc2vtk\n=======\n\n|travisci| |Coverage Status| |python-2.7,3.3,3.4-blue| |license|\n|paraview| |NEURON|\n\nSWC to VTK converter for visualizing neurons and neural circuit\nsimulations in ParaView. This software helps making beautiful\nvisualization of large scale multi-compartmental neuron simulations with\na parallelized environment. If you need any further information, please\ncheck http://daisukemiyamoto.github.io/swc2vtk/ .\n\nDependency\n----------\n\n-  tqdm\n-  numpy\n-  [STRIKEOUT:PyVTK]\n\nInstall\n-------\n\n-  $ pip install swc2vtk\n\nUsage\n-----\n\nBasic way to generate VTK file from one SWC file\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\n.. code:: python\n\n    import swc2vtk\n    vtkgen = swc2vtk.VtkGenerator()\n    vtkgen.add_swc('simple.swc')\n    vtkgen.write_vtk('simple.vtk')\n\ngenerate a VTK file from multiple SWC files\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\n.. code:: python\n\n    import swc2vtk\n    vtkgen = swc2vtk.VtkGenerator()\n    vtkgen.add_swc('simple.swc')\n    vtkgen.add_swc('simple1.swc')\n    vtkgen.add_swc('simple2.swc')\n    vtkgen.write_vtk('combined.vtk')\n\ngenerate a VTK file from SWC file with simulation data\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\n.. code:: python\n\n    import swc2vtk\n    vtkgen = swc2vtk.VtkGenerator()\n    vtkgen.add_swc('simple.swc')\n    vtkgen.add_datafile('result.dat')\n    vtkgen.write_vtk('simple.vtk')\n\n-  | data example\n   | each rows correspondence to SWC compartments\n\n   ::\n\n       -65.0\n       -65.0\n       -65.0\n       -65.0\n\ngenerate VTK files from SWC file with sequential simulation data\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\n.. code:: python\n\n    import swc2vtk\n    vtkgen = swc2vtk.VtkGenerator()\n    vtkgen.add_swc('simple.swc')\n\n    vtkgen.add_datafile('result1.dat')\n    vtkgen.write_vtk('simple1.vtk')\n\n    vtkgen.clear_datafile()\n    vtkgen.add_datafile('result2.dat')\n    vtkgen.write_vtk('simple2.vtk')\n\n    vtkgen.clear_datafile()\n    vtkgen.add_datafile('result3.dat')\n    vtkgen.write_vtk('simple3.vtk')\n\nOutput Examples\n---------------\n\nSingle Neuron Morphology\n~~~~~~~~~~~~~~~~~~~~~~~~\n\n.. figure:: https://github.com/DaisukeMiyamoto/swc2vtk/releases/download/v0.01/singleneuron_small.png\n   :alt: single\n\n   single\n\n-  `high resolution\n   version <https://github.com/DaisukeMiyamoto/swc2vtk/releases/download/v0.01/singleneuron.png>`__\n\nColoring Multiple SWC Files\n~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\n.. figure:: https://github.com/DaisukeMiyamoto/swc2vtk/releases/download/v0.01/standardbrain_small20170110.png\n   :alt: Coloring\n\n   Coloring\n\nSingle Neuron Simulation\n~~~~~~~~~~~~~~~~~~~~~~~~\n\nNeural Circuit Simulation\n~~~~~~~~~~~~~~~~~~~~~~~~~\n\nVolume Rendering\n~~~~~~~~~~~~~~~~\n\nReferences\n----------\n\n-  SWC format: http://research.mssm.edu/cnic/swc.html\n-  http://neuromorpho.org/\n-  http://www.paraview.org/\n-  http://www.vtk.org/\n\n.. |travisci| image:: https://travis-ci.org/DaisukeMiyamoto/swc2vtk.svg?branch=master\n.. |Coverage Status| image:: https://coveralls.io/repos/github/DaisukeMiyamoto/swc2vtk/badge.svg?branch=master\n   :target: https://coveralls.io/github/DaisukeMiyamoto/swc2vtk?branch=master\n.. |python-2.7,3.3,3.4-blue| image:: https://img.shields.io/badge/python-2.7,3.3,3.4-blue.svg\n.. |license| image:: https://img.shields.io/badge/license-apache-blue.svg\n.. |paraview| image:: https://img.shields.io/badge/Paraview-5.2-green.svg\n.. |NEURON| image:: https://img.shields.io/badge/NEURON-7.4-green.svg",
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