{ "info": { "author": "Wout Bittremieux", "author_email": "wout.bittremieux@uantwerpen.be", "bugtrack_url": null, "classifiers": [ "Development Status :: 4 - Beta", "Intended Audience :: Science/Research", "License :: OSI Approved :: Apache Software License", "Operating System :: MacOS", "Operating System :: Microsoft :: Windows", "Operating System :: Unix", "Programming Language :: Python :: 3.6", "Programming Language :: Python :: 3.7", "Programming Language :: Python :: 3 :: Only", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "# spectrum_utils\n\n[![Build status](https://travis-ci.org/bittremieux/spectrum_utils.svg?master)](https://travis-ci.org/bittremieux/spectrum_utils)\n![Python 3.6](https://img.shields.io/badge/python-3.6-brightgreen.svg)\n![Python 3.7](https://img.shields.io/badge/python-3.7-brightgreen.svg)\n![Python 3.8](https://img.shields.io/badge/python-3.8-brightgreen.svg)\n\nspectrum_utils is a Python package for efficient MS/MS spectrum processing and\nvisualization.\n\nspectrum_utils contains the following features:\n\n- Spectrum processing\n - Precursor & noise peak removal\n - Intensity filtering\n - Intensity scaling\n - Peak annotations\n - Modification-aware (static & variable) peptide fragments\n - SMILES-based molecules\n - Custom strings\n- Spectrum plotting\n - Fully customizable individual spectrum plots\n - Mirror plot of matching spectra\n - Interactive spectrum plots\n\n![spectrum_utils](spectrum_utils.png)\n\n## Installation\n\nspectrum_utils, including all its required dependencies, can be easily\n[installed using conda](https://anaconda.org/bioconda/spectrum_utils) from the\nBioconda channel:\n\n conda install -c bioconda spectrum_utils\n\n## Documentation\n\nPlease see the [documentation](https://spectrum-utils.readthedocs.io/) for\ndetailed installation instructions, usage examples, the API reference, and more\ninformation.\n\n## Citation\n \nspectrum_utils is freely available as open source under 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