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        "author": "Carlos Pe\u00f1a",
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            "Development Status :: 5 - Production/Stable",
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            "Programming Language :: Python :: 3",
            "Programming Language :: Python :: 3.3",
            "Programming Language :: Python :: 3.4",
            "Programming Language :: Python :: 3.5",
            "Programming Language :: Python :: Implementation :: PyPy",
            "Topic :: Scientific/Engineering :: Bio-Informatics"
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        "description": "seqrecord-expanded\n==================\n\n.. list-table::\n    :stub-columns: 1\n\n    * - tests\n      - | |travis| |requires| |coveralls|\n        | |quantified-code|\n    * - package\n      - |version| |wheel| |supported-versions| |supported-implementations|\n\n.. |travis| image:: https://travis-ci.org/carlosp420/seqrecord-expanded.svg?branch=master\n    :alt: Travis-CI Build Status\n    :target: https://travis-ci.org/carlosp420/seqrecord-expanded\n\n.. |requires| image:: https://requires.io/github/carlosp420/seqrecord-expanded/requirements.svg?branch=master\n    :alt: Requirements Status\n    :target: https://requires.io/github/carlosp420/seqrecord-expanded/requirements/?branch=master\n\n.. |coveralls| image:: https://coveralls.io/repos/carlosp420/seqrecord-expanded/badge.svg?branch=master&service=github\n    :alt: Coverage Status\n    :target: https://coveralls.io/r/carlosp420/seqrecord-expanded\n\n.. |version| image:: https://img.shields.io/pypi/v/seqrecord-expanded.svg?style=flat\n    :alt: PyPI Package latest release\n    :target: https://pypi.python.org/pypi/seqrecord-expanded\n\n.. |wheel| image:: https://img.shields.io/pypi/wheel/seqrecord-expanded.svg?style=flat\n    :alt: PyPI Wheel\n    :target: https://pypi.python.org/pypi/seqrecord-expanded\n\n.. |supported-versions| image:: https://img.shields.io/pypi/pyversions/seqrecord-expanded.svg?style=flat\n    :alt: Supported versions\n    :target: https://pypi.python.org/pypi/seqrecord-expanded\n\n.. |supported-implementations| image:: https://img.shields.io/pypi/implementation/seqrecord-expanded.svg?style=flat\n    :alt: Supported implementations\n    :target: https://pypi.python.org/pypi/seqrecord-expanded\n\n.. |quantified-code| image:: https://www.quantifiedcode.com/api/v1/project/b0bf8d6e31704c11abeb0b9043c11891/badge.svg\n   :alt: Code issues\n   :target: https://www.quantifiedcode.com/app/project/b0bf8d6e31704c11abeb0b9043c11891\n\n\nAnother SeqRecord class with methods: degenerate seqs, codon positions based on\nreading frames, etc.\n\nUsage\n-----\nBy default it assumes a DNA sequence with ambiguous characters.\n\n.. code:: python\n\n    >>> from seqrecord_expanded import SeqRecordExpanded\n    >>> seq_record = SeqRecordExpanded('TCTGAATGGAAGACAAAGCGTCCA',\n    ...                                voucher_code='CP100-09',\n    ...                                taxonomy={'genus': 'Melitaea',\n    ...                                          'species': 'phoebe',\n    ...                                         },\n    ...                                gene_code='EF1a',\n    ...                                reading_frame=1,\n    ...                                table=1,  # translation table\n    ...                                )\n    >>> # Degenerate sequence standard genetic code\n    >>> seq_record.degenerate()\n    'TCNGARTGGAARACNAARMGNCCN'\n    >>>\n    >>> # Degenerate sequence S method\n    >>> seq_record.degenerate(method='S')\n    'AGYGARTGGAARACNAARMGNCCN'\n    >>>\n    >>> # Degenerate sequence Z method\n    >>> seq_record.degenerate(method='Z')\n    'TCNGARTGGAARACNAARMGNCCN'\n    >>>\n    >>> # Degenerate sequence SZ method\n    >>> seq_record.degenerate(method='SZ')\n    'NNNGARTGGAARACNAARMGNCCN'\n    >>>\n    >>> # get first codon positions\n    >>> seq_record.first_codon_position()\n    'TGTAAACC'\n    >>>\n    >>> # get second codon positions\n    >>> seq_record.second_codon_position()\n    'CAGACAGC'\n    >>>\n    >>> # get third codon positions\n    >>> seq_record.third_codon_position()\n    'TAGGAGTA'\n    >>>\n    >>> # get first and second positions\n    >>> seq_record.first_and_second_positions()\n    'TCGATGAAACAACGCC'\n    >>>\n    >>> # translate to aminoacid sequence\n    >>> seq_record.translate()\n    'SEWKTKRP'\n    >>> # translate to aminoacid sequence\n    >>> seq_record.translate(table=1)\n    'SEWKTKRP'\n\nInstallation\n------------\n\n.. code-block:: shell\n\n    pip install seqrecord-expanded\n\nRequirements\n^^^^^^^^^^^^\n\n.. code-block:: shell\n\n    pip install -r requirements.txt\n\n\nCompatibility\n-------------\nSupported Python versions: 2.6, 2.7, 3.3, 3.4, 3.5, pypy.\n\nLicence\n-------\nBSD.\n\nAuthors\n-------\n\n`seqrecord-expanded` was written by `Carlos Pe\u00f1a <mycalesis@gmail.com>`_.\n",
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