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    "info": {
        "author": "Anthony Aylward",
        "author_email": "aaylward@eng.ucsd.edu",
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        "description": "# seqalign\n\nManage sequence alignments\n\n## Installation\n\n```sh\npip3 install seqalign\n```\nor\n```sh\npip3 install --user seqalign\n```\n\n## Examples\n\n```python\nwith SequenceAlignment(<path to input BAM or FASTQ file>) as sa:\n    sa.cleans_up_bam = False\n    sa.remove_supplementary_alignments()\n    sa.samtools_sort(memory_limit=10)\n    sa.samtools_index()\n    sa.write(<path to output BAM file>)\n```\n\n## Notes\n\nThe `input_file` argument to `SequenceAlignment()` should be a string for\nsingle-end reads or for data that is already aligned. For raw paired-end reads,\nit should be a tuple containing two strings giving the paths to the two\nFASTA / FASTQ files.\n\n\n",
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        "summary": "Manage sequence alignments",
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