{
    "info": {
        "author": "Jason L Weirather",
        "author_email": "jason.weirather@gmail.com",
        "bugtrack_url": null,
        "classifiers": [
            "Development Status :: 3 - Alpha",
            "Intended Audience :: Science/Research",
            "License :: OSI Approved :: Apache Software License",
            "Topic :: Scientific/Engineering :: Bio-Informatics"
        ],
        "description": "# py-seq-tools\nFree python libraries for working with biological sequences, alignments, and formats. These libraries are part of Au-public scripts, I haven't documented them well yet.  The goal here is to put them into a package and get them better documented.\n\nLonger term, these were written in python 2, but it would be nice to either support python3 full compatability or to completely migrate them over to python3.\n\nThe command line utilities of this package serve a dual purpose. 1) is to provide useful utilities you can run through the commandline, and 2) is to provide examples on how to make use the of the libraries included in this package.\n\nAccess to the command line utilities can be found with\n\n`$ seq-tools <cli command>`\n\nWhere cli command is the name of a cli module.\n\nTo use the libraries in this distribution please consult the [API documentation](https://github.com/jason-weirather/py-seq-tools/blob/master/manual.pdf)\n\nYou can install seq-tools with pip\n\n>From within the source directory you can try\n\n`$ pip install .`\n\nThis should make the `seq-tools` command available as well as the `seqtools` library for import.\n\nThis library includes the following modules:\n\n* seqtools\n  * align\n  * errors\n  * format\n    * bamindex\n    * bed\n    * bgzf\n    * fasta\n    * fastq\n    * pacbio\n    * psl\n    * sam\n  * graph\n  * range\n  * sequence\n  * simulation\n    * emitter\n    * permute\n    * randomsource\n  * statistics\n  * stream\n  * structure\n\nAgain, details are available in the [API documentation](https://github.com/jason-weirather/py-seq-tools/blob/master/manual.pdf).\n\n\n",
        "description_content_type": null,
        "docs_url": null,
        "download_url": "",
        "downloads": {
            "last_day": -1,
            "last_month": -1,
            "last_week": -1
        },
        "home_page": "https://github.com/jason-weirather/py-seq-tools",
        "keywords": "bioinformatics,sequence,alignment",
        "license": "Apache License, Version 2.0",
        "maintainer": "",
        "maintainer_email": "",
        "name": "seq-tools",
        "package_url": "https://pypi.org/project/seq-tools/",
        "platform": "",
        "project_url": "https://pypi.org/project/seq-tools/",
        "project_urls": {
            "Homepage": "https://github.com/jason-weirather/py-seq-tools"
        },
        "release_url": "https://pypi.org/project/seq-tools/1.0.10/",
        "requires_dist": null,
        "requires_python": "",
        "summary": "Python tools for working with biological sequence data",
        "version": "1.0.10"
    },
    "last_serial": 3307285,
    "releases": {
        "0.1.0": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "f4ee9de1a3358a15cba18ef4de59cdf0",
                    "sha256": "30692ff52f88362a00fa34e22dbab73fe9874c7de99036d56933860843a9fe90"
                },
                "downloads": -1,
                "filename": "seq_tools-0.1.0-py2-none-any.whl",
                "has_sig": false,
                "md5_digest": "f4ee9de1a3358a15cba18ef4de59cdf0",
                "packagetype": "bdist_wheel",
                "python_version": "py2",
                "requires_python": null,
                "size": 34916,
                "upload_time": "2017-01-22T06:52:32",
                "url": "https://files.pythonhosted.org/packages/64/74/acadc2a6ee41e53a8b1b279238b7ecb3b4d975c32e9cce79e0cacffdf33b/seq_tools-0.1.0-py2-none-any.whl"
            },
            {
                "comment_text": "",
                "digests": {
                    "md5": "a7aa4c47746c4a844b5373067583eff9",
                    "sha256": "1c0b665e2d566382b7c4c28fcc9e74e9d5f94e3cacffd6831354fa33bb1e5e61"
                },
                "downloads": -1,
                "filename": "seq-tools-0.1.0.tar.gz",
                "has_sig": false,
                "md5_digest": "a7aa4c47746c4a844b5373067583eff9",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 30926,
                "upload_time": "2017-01-22T06:52:34",
                "url": "https://files.pythonhosted.org/packages/b7/8b/14eefd9ad0a82a5e55301f1a14b99f8f5d1318355b1e7d5e7af3d88a2f6f/seq-tools-0.1.0.tar.gz"
            }
        ],
        "0.2.0": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "b583fd40230a919b17a6d097cf49377e",
                    "sha256": "f491302a325fae86b07a93abafb16a41aaf0afa0649866319d7743bb265e8db3"
                },
                "downloads": -1,
                "filename": "seq_tools-0.2.0-py2-none-any.whl",
                "has_sig": false,
                "md5_digest": "b583fd40230a919b17a6d097cf49377e",
                "packagetype": "bdist_wheel",
                "python_version": "py2",
                "requires_python": null,
                "size": 43629,
                "upload_time": "2017-01-29T18:32:07",
                "url": "https://files.pythonhosted.org/packages/a9/c9/457aded07024c16d07934a4caf439e0664db80690eaa9d9842ecb67c565f/seq_tools-0.2.0-py2-none-any.whl"
            },
            {
                "comment_text": "",
                "digests": {
                    "md5": "196aef9100a585f21d0f4caec3bb8b8f",
                    "sha256": "441314a3dee4723454c030fa0d13c6888430aa092cf99869ae0ae44a29e6d8d2"
                },
                "downloads": -1,
                "filename": "seq-tools-0.2.0.tar.gz",
                "has_sig": false,
                "md5_digest": "196aef9100a585f21d0f4caec3bb8b8f",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 39137,
                "upload_time": "2017-01-29T18:32:09",
                "url": "https://files.pythonhosted.org/packages/b6/3a/84aa0baa3eda8cad6707e6e9bd7690a2d5eda90f5ce77fdd06e89b7e3c71/seq-tools-0.2.0.tar.gz"
            }
        ],
        "1.0.10": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "2e6170476d2f3635a114e362ed2dd32c",
                    "sha256": "553cabf6b25a4596f3f1822c3b6e0f2a125f75988b42e9c28e0c27f9c75a25b4"
                },
                "downloads": -1,
                "filename": "seq_tools-1.0.10-py2-none-any.whl",
                "has_sig": false,
                "md5_digest": "2e6170476d2f3635a114e362ed2dd32c",
                "packagetype": "bdist_wheel",
                "python_version": "py2",
                "requires_python": null,
                "size": 348942,
                "upload_time": "2017-11-05T16:07:36",
                "url": "https://files.pythonhosted.org/packages/89/d8/731beed661b61f466e1e1fc711869dbd5b5e52a66c94cc7ada12e8eb7c5c/seq_tools-1.0.10-py2-none-any.whl"
            },
            {
                "comment_text": "",
                "digests": {
                    "md5": "71ac45a6615a374be68b7a6117cd46d5",
                    "sha256": "6563c523c17df5189f1f1987f46859c7e449ffe2507403d3238882f231d87834"
                },
                "downloads": -1,
                "filename": "seq-tools-1.0.10.tar.gz",
                "has_sig": false,
                "md5_digest": "71ac45a6615a374be68b7a6117cd46d5",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 238543,
                "upload_time": "2017-11-05T16:07:38",
                "url": "https://files.pythonhosted.org/packages/82/ec/1a378a4bc5603a6fc8534d700dcadcb211cce25ea567e75a11e558feb4e9/seq-tools-1.0.10.tar.gz"
            }
        ],
        "1.0.7": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "adf342ec5836092ce3b69e8b5edf4ae9",
                    "sha256": "d17cd37a1342507c3e2bfaa20f5996f99306da4e2b36638c3712c736ad8f1c05"
                },
                "downloads": -1,
                "filename": "seq-tools-1.0.7.tar.gz",
                "has_sig": false,
                "md5_digest": "adf342ec5836092ce3b69e8b5edf4ae9",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 488052,
                "upload_time": "2017-08-12T23:33:23",
                "url": "https://files.pythonhosted.org/packages/d6/5c/ccf81112b2b1e9f99e68d2ee44a9c1f0810d8891df1e5debd76183d5b6e9/seq-tools-1.0.7.tar.gz"
            }
        ],
        "1.0.9": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "75af5b40695965c5d8295a0f1ec18415",
                    "sha256": "e219c74737b6a96d06f1f958c62147d255a6644aeef226eb7f002507adce46f9"
                },
                "downloads": -1,
                "filename": "seq_tools-1.0.9-py2-none-any.whl",
                "has_sig": false,
                "md5_digest": "75af5b40695965c5d8295a0f1ec18415",
                "packagetype": "bdist_wheel",
                "python_version": "py2",
                "requires_python": null,
                "size": 349659,
                "upload_time": "2017-09-17T23:58:49",
                "url": "https://files.pythonhosted.org/packages/ad/07/3893fb757b1adf0d6189e9d0732317c7495de5258f72c04bc425cc55ed0d/seq_tools-1.0.9-py2-none-any.whl"
            },
            {
                "comment_text": "",
                "digests": {
                    "md5": "afba6d3bfcce9b5eb1796d91e468c023",
                    "sha256": "1339f90d35611e90199377468f572850cb448aff5e18e8f91759b2fbf295f131"
                },
                "downloads": -1,
                "filename": "seq-tools-1.0.9.tar.gz",
                "has_sig": false,
                "md5_digest": "afba6d3bfcce9b5eb1796d91e468c023",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 234067,
                "upload_time": "2017-09-17T23:58:52",
                "url": "https://files.pythonhosted.org/packages/3f/e6/68abbdd0fe0074ea362f405b60b70ea3eab59c5467d5fee8bc8a60c43815/seq-tools-1.0.9.tar.gz"
            }
        ]
    },
    "urls": [
        {
            "comment_text": "",
            "digests": {
                "md5": "2e6170476d2f3635a114e362ed2dd32c",
                "sha256": "553cabf6b25a4596f3f1822c3b6e0f2a125f75988b42e9c28e0c27f9c75a25b4"
            },
            "downloads": -1,
            "filename": "seq_tools-1.0.10-py2-none-any.whl",
            "has_sig": false,
            "md5_digest": "2e6170476d2f3635a114e362ed2dd32c",
            "packagetype": "bdist_wheel",
            "python_version": "py2",
            "requires_python": null,
            "size": 348942,
            "upload_time": "2017-11-05T16:07:36",
            "url": "https://files.pythonhosted.org/packages/89/d8/731beed661b61f466e1e1fc711869dbd5b5e52a66c94cc7ada12e8eb7c5c/seq_tools-1.0.10-py2-none-any.whl"
        },
        {
            "comment_text": "",
            "digests": {
                "md5": "71ac45a6615a374be68b7a6117cd46d5",
                "sha256": "6563c523c17df5189f1f1987f46859c7e449ffe2507403d3238882f231d87834"
            },
            "downloads": -1,
            "filename": "seq-tools-1.0.10.tar.gz",
            "has_sig": false,
            "md5_digest": "71ac45a6615a374be68b7a6117cd46d5",
            "packagetype": "sdist",
            "python_version": "source",
            "requires_python": null,
            "size": 238543,
            "upload_time": "2017-11-05T16:07:38",
            "url": "https://files.pythonhosted.org/packages/82/ec/1a378a4bc5603a6fc8534d700dcadcb211cce25ea567e75a11e558feb4e9/seq-tools-1.0.10.tar.gz"
        }
    ]
}