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        "author": "Hyeshik Chang",
        "author_email": "hyeshik@snu.ac.kr",
        "bugtrack_url": null,
        "classifiers": [
            "Development Status :: 3 - Alpha",
            "Environment :: Console",
            "Intended Audience :: Healthcare Industry",
            "Intended Audience :: Science/Research",
            "License :: OSI Approved :: MIT License",
            "Operating System :: POSIX",
            "Programming Language :: Python",
            "Topic :: Scientific/Engineering :: Bio-Informatics"
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        "description": "# SeamlessF5\nSeamlessF5 adds useful missing features that helps making transitions to\nOxford Nanopore Technologies's\n[new multi-read FAST5 format](https://community.nanoporetech.com/posts/fast5-file-format-change).\n\n## Installation\nSeamlessF5 can be installed using [pip](http://pypi.python.org/pypi/pip)\nfor Python 3.5+.\n\n```bash\npip install seamlessf5\n```\n\n## Conversion from single FAST5 files in `tar` to multi-read FAST5\nWith the `sf5_single_to_multi_fast5` wrapper, ONT's `single_to_multi_fast5`\nbecomes capable of loading single-read FAST5 files from `tar` or compressed\n`tar` files.\n\n```bash\nsf5_single_to_multi_fast5 -i fast5.tar.gz -s save_path --recursive\n```\n\n## Running albacore for multi-read FAST5\nThis package also installs wrappers, `sf5_read_fast5_basecaller.py`,\n`sf5_full_1dsq_basecaller.py`, and `sf5_paired_read_basecaller.py` which\nenable loading multi-read FAST5 files for ONT's albacore.\n\n```bash\nsf5_read_fast5basecaller.py -i multiread-fast5-dir ...\n```\n\n\n\n",
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        "keywords": "nanopore,fast5,converter,wrapper",
        "license": "MIT",
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        "name": "seamlessf5",
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        "summary": "Helpers for smoother transitioning to multi-read FAST5 files",
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