{ "info": { "author": "Matt Clarkson", "author_email": "m.clarkson@ucl.ac.uk", "bugtrack_url": null, "classifiers": [ "Development Status :: 3 - Alpha", "Intended Audience :: Developers", "Intended Audience :: Healthcare Industry", "Intended Audience :: Information Technology", "Intended Audience :: Science/Research", "License :: OSI Approved :: BSD License", "Programming Language :: Python", "Programming Language :: Python :: 2", "Programming Language :: Python :: 3", "Topic :: Scientific/Engineering :: Information Analysis", "Topic :: Scientific/Engineering :: Medical Science Apps." ], "description": "scikit-surgeryutils \n===============================\n\n.. image:: https://github.com/SciKit-Surgery/scikit-surgeryutils/raw/master/weiss_logo.png\n :height: 128px\n :width: 128px\n :target: https://github.com/SciKit-Surgery/scikit-surgeryutils \n :alt: Logo\n\n|\n\n.. image:: https://github.com/SciKit-Surgery/scikit-surgeryutils/workflows/.github/workflows/ci.yml/badge.svg\n :target: https://github.com/SciKit-Surgery/scikit-surgeryutils/actions\n :alt: GitHub Actions CI statuss\n\n.. image:: https://coveralls.io/repos/github/SciKit-Surgery/scikit-surgeryutils/badge.svg?branch=master&service=github\n :target: https://coveralls.io/github/SciKit-Surgery/scikit-surgeryutils?branch=master\n :alt: Test coverage\n\n.. image:: https://readthedocs.org/projects/scikit-surgeryutils /badge/?version=latest\n :target: http://scikit-surgeryutils .readthedocs.io/en/latest/?badge=latest\n :alt: Documentation Status\n\n.. image:: https://img.shields.io/badge/Contributor%20Covenant-2.1-4baaaa.svg\n :target: CODE_OF_CONDUCT.md\n\n.. image:: https://img.shields.io/twitter/follow/scikit_surgery?style=social\n :target: https://twitter.com/scikit_surgery?ref_src=twsrc%5Etfw\n :alt: Follow scikit_surgery on twitter\n\n\nscikit-surgeryutils is part of the `SciKit-Surgery`_ software project, developed at the `Wellcome EPSRC Centre for Interventional and Surgical Sciences`_, part of `University College London (UCL)`_.\n\nscikit-surgeryutils containing small demo apps and utilities.\n\n.. features-start\n\nFeatures\n--------\n* `Common overlay apps `_ - Examples of common uses of scikit-surgeryvtk's VTKOverlayWindow. Includes overlaying on a video feed, duplicating a feed.\n\nCommand Line Apps\n-----------------\n* sksurgeryvideolag.py - shows a millisecond timer and video image to crudely measure measure lag.\n* sksurgerycharucotest.py - extracts charuco points and annotates video image with each id detected.\n* sksurgeryrendermodelslikecamera.py - renders a VTK model, over background image, using OpenCV camera intrinsics.\n* sksurgerymakecalibrationdots.py - Create a calibraiton dot pattern.\n* sksurgeryreslice.py - DICOM reslice widget demo.\n* sksurgerytextoverlay.py - VTK text overlay demo.\n* sksurgerytransformpolydata.py - Read a surface mesh (.vtk,.vtp,.stl,.ply file), transform by 4x4 matrix and write as .vtk.\n\n.. features-end\n\nInstalling\n----------\n\nYou can pip install directly from the repository as follows:\n\n::\n\n pip install git+https://github.com/SciKit-Surgery/scikit-surgeryutils\n\n\nDeveloping\n----------\n\nCloning\n^^^^^^^\n\nYou can clone the repository using the following command:\n\n::\n\n git clone https://github.com/SciKit-Surgery/scikit-surgeryutils\n\n\nRunning the tests\n^^^^^^^^^^^^^^^^^\n\nYou can run the unit tests by installing and running tox:\n\n::\n\n pip install tox\n tox\n\n\nContributing\n^^^^^^^^^^^^\n\nPlease see the `contributing guidelines`_.\n\n\nUseful links\n^^^^^^^^^^^^\n\n* `Source code repository`_\n* `Documentation`_\n\n\nLicensing and copyright\n-----------------------\n\nCopyright 2018 University College London.\nscikit-surgeryutils is released under the BSD-3 license. 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