{ "info": { "author": "Andre Schultz", "author_email": "schultzdre@gmail.com", "bugtrack_url": null, "classifiers": [ "License :: OSI Approved :: MIT License", "Operating System :: OS Independent", "Programming Language :: Python :: 3" ], "description": "# SAMMIpy\n\nThis package provides a wrapper for running the Semi-Automated Metabolic Map Illustrator (SAMMI) from Python scripts and the Python command line. The SAMMI tool can be found at [www.sammitool.com](https://www.sammitool.com). The package works with the [COBRApy](https://opencobra.github.io/cobrapy/) toolbox and requires an internet connection to render maps. For more complex, up-to-date examples and to learn how to use the tool please check out the examples in the Jupyter Notebook file.\n\n## Documentation\nThe SAMMIpy documentation can be found [here](https://sammipy.readthedocs.io/en/latest/).\n\n## Installation\n\nTo install the package run ```pip install sammi``` from the Python command line.\n\n## Usage\n\nTo use the SAMMI package run ```import sammi``` from within your python code. The function ```sammi.plot``` reads the template file ```index.html``` located at ```sammi.__path__[0] + '\\\\browser'```, and outputs the generated map to the same folder in the file defined within the function (defaulting to ```index_load.html```). \n\nTo open previously generated maps use ```sammi.openmap(htmlName)```. Once maps are generated they can be exported in the SAMMI specific format to be shared and saved.\n\n## Help\n\nFor help check ```help(sammi.plot)``` within Python or read the SAMMIpy documentation [here](https://sammipy.readthedocs.io/en/latest/). Users can also look at the examples provided in the documentation and the Jupyter Notebook in this folder. All of the examples provided in the notebook can be run using ```sammi.test(n)``` where ```n``` ranges from zero to eleven.\n\n", "description_content_type": "text/markdown", "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/schultzdre/SAMMIpy.git", "keywords": "", "license": "", "maintainer": "", "maintainer_email": "", "name": "sammi", "package_url": "https://pypi.org/project/sammi/", "platform": "", "project_url": "https://pypi.org/project/sammi/", "project_urls": { "Homepage": "https://github.com/schultzdre/SAMMIpy.git" }, "release_url": "https://pypi.org/project/sammi/0.1.2/", "requires_dist": null, "requires_python": "", "summary": "A wrapper for running the Semi-Automated Metabolic Map Illustrator (SAMMI) using Python", "version": "0.1.2" }, "last_serial": 5626036, "releases": { "0.0.15": [ { "comment_text": "", "digests": { "md5": "af8161df046cf11b56baabd523a8daa9", "sha256": 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