{ "info": { "author": "Martin Skarzynski", "author_email": "marskar@gmail.com", "bugtrack_url": null, "classifiers": [ "Development Status :: 4 - Beta", "Intended Audience :: Developers", "License :: OSI Approved :: MIT License", "Natural Language :: English", "Programming Language :: Python :: 3.6", "Programming Language :: Python :: 3.7" ], "description": "Rmdawn: a Python package for programmatic R markdown workflows\n==============================================================\n\n|Chat| |Build| |License| |PyPI| |Status| |Updates| |Versions|\n\nIntroduction\n------------\n\nThe ``rmdawn`` Python package allows you to (de)construct, convert, and render `R Markdown `__ (Rmd) files in\n\n- your terminal (e.g. ``bash``, ``zsh``, ``fish``, etc.) or\n- your favorite Python environment (e.g. `PyCharm `__ or `Visual Studio Code `__).\n\nThe ``rmdawn`` Python package consists of 6 shell commands and functions:\n\n- ``rmdawn``, which concatenates input files to generate an Rmd file.\n- ``rmdusk``, which extracts 1) a YAML file, 2) Python or R scripts and 3) `Markdown `__ (md) files from Rmd files.\n- ``rmdtor``, which converts Rmd files into R scripts using `knitr::purl `__.\n- ``rtormd``, which converts R scripts into Rmd files using `knitr::spin `__.\n- ``render``, which creates rendered versions of R scripts or Rmd files into HTML, PDF, Word, and `other output file formats `__.\n- ``catren``, which combines the functionality of ``rmdawn`` and ``render`` to generate an Rmd file from source files and then create an output file.\n\nAll ``rmdawn`` functions and commands, except for ``rmdawn`` and ``rmdusk``, rely on the `rpy2 `__ Python library.\nThe command line interface relies on the `click `__ Python library.\n\nFor a related package that provides programmatic tools for working with `Jupyter\nNotebooks `__,\ncheck out the `Nbless Python package `__.\n\nDocumentation and Code\n----------------------\n\nThe documentation is hosted at https://py4ds.github.io/rmdawn/.\n\nThe code is hosted at https://github.com/py4ds/rmdawn.\n\nInstallation\n------------\n\n.. code:: sh\n\n pip install rmdawn\n\nor clone the `repo `__, e.g. ``git clone https://github.com/py4ds/rmdawn`` and install locally using setup.py (``python setup.py install``) or ``pip`` (``pip install .``).\n\n\nCreating an R markdown file with the ``rmdawn`` shell command\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\n.. code:: sh\n\n rmdawn header.yml intro.md scrape.py plot.R notes.txt > example.Rmd\n\nInstead of redirecting to a file (``>``), you can use the ``--out_file`` or ``-o`` flag:\n\n.. code:: sh\n\n rmdawn header.yml intro.md scrape.py plot.R notes.txt -o example.Rmd\n\nThe easiest way to handle large numbers of files is to use the ``*`` wildcard in the shell.\n\n.. code:: sh\n\n rmdawn source_file* -o example.Rmd\n\nExtract YAML, markdown, and code files from R markdown files with the ``rmdusk`` shell command\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\n.. code:: sh\n\n rmdusk example.Rmd\n\nConvert between R markdown and R code files with the ``rmdtor`` and ``rtormd`` shell commands\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\n.. code:: sh\n\n rmdtor example.Rmd\n\n rtormd example.R\n\nYou can also specify an new filename with ``--out_file`` or ``-o`` flag.\n\n.. code:: sh\n\n rmdtor example.Rmd -o new.R\n\n rtormd example.R -o new.Rmd\n\nRender R markdown and R code files with the ``render`` shell command\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\nThe default output format is HTML.\n\n.. code:: sh\n\n render example.Rmd\n render example.R\n\nYou can specify output format with the ``--format`` or ``-f`` flag.\n\n.. code:: sh\n\n render example.Rmd -f word_document\n render example.R -f word_document\n\nIf you only specify output filename with the ``--out_file`` or ``-o`` flag,\n``render`` will try to infer the output format from the file extension.\nThis will not work for slides or R markdown notebooks.\n\n.. code:: sh\n\n render example.Rmd -o example.pdf\n render example.R -o example.pdf\n\nCreate an R markdown file from source files with the ``catren`` shell command\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\nYou can pass ``--rmd_file`` (``-r``), ``--out_file`` (``-o``), and ``--format`` (``-f``) arguments to ``catren``.\n\nThe default output format is HTML.\n\n.. code:: sh\n\n catren header.yml intro.md scrape.py plot.R notes.txt -r example.Rmd\n\nIf you only specify an output filename with the ``--out_file`` or ``-o`` flag,\n``catren`` will try to infer the R markdown file name and output format from the file extension.\n\n.. code:: sh\n\n catren header.yml intro.md scrape.py plot.R notes.txt -o example.pdf\n\nIf you only specify an output format with the ``--format`` or ``-f`` flag or do not provide any optional arguments,\n``catren`` will create a temporary file in a temporary location.\n\n.. code:: sh\n\n catren header.yml intro.md scrape.py plot.R notes.txt -f word_document\n catren header.yml intro.md scrape.py plot.R notes.txt\n\nBasic usage: Python environment\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\n.. code:: python\n\n from pathlib import Path\n\n from rmdawn import rmdawn\n from rmdawn import rmdusk\n from rmdawn import rtormd\n from rmdawn import rmdtor\n from rmdawn import render\n from rmdawn import catren\n\n # Create an R markdown file from source files\n file_list = [\"header.yml\", \"intro.md\", \"scrape.py\", \"plot.R\", \"notes.txt\"]\n Path(\"example.Rmd\").write_text(rmdawn(file_list))\n\n # Extract source files from an R markdown file\n rmdusk(\"example.Rmd\")\n\n # Convert R markdown files into R scripts\n rmdtor(\"example.Rmd\")\n\n # Convert R scripts into R markdown files\n rtormd(\"example.R\")\n\n # Generate output files from R scripts or R markdown files\n render(\"example.Rmd\") # The default format is HTML\n render(\"example.R\") # The default format is HTML\n render(\"example.Rmd\", out_format=\"pdf_document\")\n render(\"example.R\", out_format=\"word_document\")\n\n # Create an R markdown file from source files output files and render it\n file_list = [\"header.yml\", \"intro.md\", \"scrape.py\", \"plot.R\", \"notes.txt\"]\n catren(file_list, rmd_file=\"example.Rmd\") # The default format is HTML\n catren(file_list, rmd_file=\"example.Rmd\", out_format=\"pdf_document\")\n catren(file_list, out_file=\"example.html\")\n\n # Another alternative is to import the package and use it as a namespace.\n import rmdawn\n\n rmdawn.rmdawn([\"header.yml\", \"intro.md\", \"scrape.py\", \"plot.R\", \"notes.txt\"])\n rmdawn.rmdusk(\"example.Rmd\")\n rmdawn.rtormd(\"example.R\")\n rmdawn.rmdtor(\"example.Rmd\")\n rmdawn.render(\"example.Rmd\") # The default format is HTML\n\nNext Steps\n----------\n\nCurrently, `xaringan `__ slides require a special format.\n\n- Write ``remark``/``demark`` functions and commands to add/remove slide delimiters ``---`` before headers ``#``.\n\n.. |Chat| image:: https://badges.gitter.im/py4ds/rmdawn.svg\n :alt: Join the chat at https://gitter.im/py4ds/rmdawn\n :target: https://gitter.im/py4ds/rmdawn\n.. |Build| image:: https://travis-ci.org/py4ds/rmdawn.svg?branch=master\n :target: https://travis-ci.org/py4ds/rmdawn\n.. |License| image:: https://img.shields.io/badge/License-MIT-purple.svg\n :target: https://opensource.org/licenses/MIT\n.. |PyPI| image:: https://img.shields.io/pypi/v/rmdawn.svg\n :target: https://pypi.python.org/pypi/rmdawn\n.. |Status| image:: https://www.repostatus.org/badges/latest/active.svg\n :alt: Project Status: Active \u2013 The project has reached a stable, usable state and is being actively developed.\n :target: https://www.repostatus.org/#active\n.. |Updates| image:: https://pyup.io/repos/github/py4ds/rmdawn/shield.svg\n :target: 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