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        "description": "# Refget Compliance Suite\n\nRepository for the [refget API](http://samtools.github.io/hts-specs/refget.html) Compliance document and test suite.\n\n## Important URLS\n\n- [Refget specification](http://samtools.github.io/hts-specs/refget.html)\n- [Compliance Document](https://compliancedoc.readthedocs.io/en/latest/)\n- [Compliance utility documentation](https://compliancedoc.readthedocs.io/en/latest/utility/)\n\n## Installing the compliance suite\n\n```bash\npip3 install refget-compliance\n```\n\n## Running the compliance suite\n\nThe following will generate a HTML report for your server and serve said HTML. It will also generate a tarball locally of the report\n\n```bash\nrefget-compliance report -s https://refget.server.com/ --serve\n```\n\nThe following will generate a JSON report of your server:\n\n```bash\nrefget-compliance report -s https://refget.server.com/ --json server.json\n```\n\nSetting `--json -` will have the compliance suite write the JSON to STDOUT.\n\n# Additional components\n\n## Building and uploading the package to PyPI\n\nFirst do your edits, test and update `setup.py` with your new version number. Then run the following and provide your user credentials before doing this. This will upload the compliance suite to the test PyPI server.\n\n```bash\npython3 setup.py sdist bdist_wheel\ntwine upload --repository-url https://test.pypi.org/legacy/ dist/*\n```\n\nAssuming this works then upload to live PyPI and provide your live login details.\n\n```bash\ntwine upload dist/*\n```\n\n## Compliance Documentation\n\nTo generate this documentation locally, follow these steps:\n\n```bash\ngit clone https://github.com/ga4gh/refget-compliance.git\n\ncd refget-compliance\n\npip3 install mkdocs\n\nmkdocs serve\n```\n\n## Compliance Test Suite\n\nCompliance test suite is an API testing suite for refget servers.\n\nTo run the tests, follow these steps:\n\n```bash\ngit clone https://github.com/ga4gh/refget-compliance.git\n\ncd refget-compliance-suite/test_suite\n\npip3 install -r requirements.txt\n```\n\nIf the server to be tested supports circular sequences then run\n\n```bash\npy.test --server <your-server-base-url-without-http://-prefix> --cir\n```\n\nand if it doesn't support circular sequences then run\n\n```bash\npy.test --server <your-server-base-url-without-http://-prefix>\n```\n\nIf the server to be tested supports trunc512 algorithm then run\n\n```bash\npy.test --server <your-server-base-url-without-http://-prefix> --trunc512\n```\n\nand if it doesn't support trunc512 algorithm then run\n\n```bash\npy.test --server <your-server-base-url-without-http://-prefix>\n```\n\nIf the server to be tested redirects success queries then run\n\n```bash\npy.test --server <your-server-base-url-without-http://-prefix> --redir\n```\n\nAnd if it doesn't redirects then run\n\n```bash\npy.test --server <your-server-base-url-without-http://-prefix>\n```\n\nYou can try multiple combinations of these flags as per the server implementation for example\n\n```bash\npy.test --server <your-server-base-url-without-http://-prefix> --cir --trunc512\n\npy.test --server <your-server-base-url-without-http://-prefix> --cir --redir\n\npy.test --server <your-server-base-url-without-http://-prefix> --redir --trunc512\n\npy.test --server <your-server-base-url-without-http://-prefix> --cir --trunc512 --redir\n```\n\n\n",
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