{ "info": { "author": "Arun Ahuja", "author_email": "aahuja11 {at} gmail {dot}", "bugtrack_url": null, "classifiers": [ "Development Status :: 3 - Alpha", "Environment :: Console", "Intended Audience :: Science/Research", "Operating System :: OS Independent", "Programming Language :: Python", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "pytcga\n------\n\nPython library for accessing and processing public TCGA data\n\nExamples\n--------\n\nLoading Clinical Data\n^^^^^^^^^^^^^^^^^^^^^\n\n.. code:: python\n\n\n import pytcga\n\n # Downloading and loading LUAD patient data\n clinical = pytcga.load_clinical_data('luad')\n\nLoading Mutation Data\n^^^^^^^^^^^^^^^^^^^^^\n\n.. code:: python\n\n import pytcga\n\n # Downloading and loading LUAD mutations\n luad_mutations = \\\n pytcga.load_mutation_data(disease_code='LUAD', with_clinical=False)\n\n\n # Also appends clinical data with `with_clinical` flag\n luad_mutations = \\\n pytcga.load_mutation_data(disease_code='LUAD', with_clinical=True)\n\n # Filter variants with the `variant_type` argument\n # variant_type = {'all', 'indel', SNP', 'INS', 'DEL'}\n luad_indel_mutations = \\\n pytcga.load_mutation_data(disease_code='LUAD', with_clinical=True, variant_type='indel')\n\nLoading RNASeq Data\n^^^^^^^^^^^^^^^^^^^\n\n.. code:: python\n\n import pytcga\n\n # Downloading and loading LUAD mutations\n luad_rnaseq = \\\n pytcga.load_rnaseq_data(disease_code='LUAD', with_clinical=True)", "description_content_type": null, "docs_url": null, "download_url": "UNKNOWN", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/arahuja/pytcga", "keywords": null, "license": "UNKNOWN", "maintainer": null, "maintainer_email": null, "name": "pytcga", "package_url": "https://pypi.org/project/pytcga/", "platform": "UNKNOWN", "project_url": "https://pypi.org/project/pytcga/", "project_urls": { "Download": "UNKNOWN", "Homepage": "https://github.com/arahuja/pytcga" }, "release_url": "https://pypi.org/project/pytcga/0.0.4/", "requires_dist": null, "requires_python": null, "summary": "Store and query public TCGA data", "version": "0.0.4" }, "last_serial": 1909102, "releases": { "0.0.1": [ { "comment_text": "", "digests": { "md5": "f62ff9a07982cd7b8d17bc5eafc0ae55", "sha256": "07bfa2899c295a1eb5a0661dca2859721066bf2fed635e95b4aaf64e9ded9fed" }, "downloads": -1, "filename": "pytcga-0.0.1.tar.gz", "has_sig": false, "md5_digest": "f62ff9a07982cd7b8d17bc5eafc0ae55", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 5543, "upload_time": "2016-01-14T21:19:17", "url": "https://files.pythonhosted.org/packages/fb/6c/4415eb5e1e2f7151499bf9a80d2fe0234556cdba3bb6e3f1cbefa78523ec/pytcga-0.0.1.tar.gz" } ], "0.0.2": [ { "comment_text": "", "digests": { "md5": "a2df8b2f5cea026915aa940e7eba2360", "sha256": "389cb981617632f33c98dd00b0c70a882c38645d4cee119b090c7fb8234c3d3e" }, "downloads": -1, "filename": "pytcga-0.0.2.tar.gz", "has_sig": false, "md5_digest": "a2df8b2f5cea026915aa940e7eba2360", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 6218, "upload_time": "2016-01-15T15:31:04", "url": "https://files.pythonhosted.org/packages/bb/08/65f8889c3945e65f42b486b914c6b9999a67c3e0523acf860dd0457f974f/pytcga-0.0.2.tar.gz" } ], "0.0.3": [ { "comment_text": "", "digests": { "md5": "929ee0b6c8553e4a929e08344673dbfb", "sha256": "1aa84a8f0eece4f94b9f1b4d0c76dac83d9137c83cb14c5d1882d9ab9fd39ae4" }, "downloads": -1, "filename": "pytcga-0.0.3.tar.gz", "has_sig": false, "md5_digest": "929ee0b6c8553e4a929e08344673dbfb", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 6223, "upload_time": "2016-01-16T19:48:22", "url": "https://files.pythonhosted.org/packages/36/bb/29dbc07c92f28f918994a6861cec858491c2b9101a088c90143f755e182c/pytcga-0.0.3.tar.gz" } ], "0.0.4": [ { "comment_text": "", "digests": { "md5": "246b8320d2dbffaa1327b3609a364e9f", "sha256": "72978b97ecbcf7d8230dba54cc7db61e05892ebf534c085d64a4e13e24acc50c" }, "downloads": -1, "filename": "pytcga-0.0.4.tar.gz", "has_sig": false, "md5_digest": "246b8320d2dbffaa1327b3609a364e9f", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 6229, "upload_time": "2016-01-17T23:45:47", "url": "https://files.pythonhosted.org/packages/2a/5a/2f51dd0e796bef4057ec80640cd949a59779d59078dce3f01763d1991091/pytcga-0.0.4.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "246b8320d2dbffaa1327b3609a364e9f", "sha256": "72978b97ecbcf7d8230dba54cc7db61e05892ebf534c085d64a4e13e24acc50c" }, "downloads": -1, "filename": "pytcga-0.0.4.tar.gz", "has_sig": false, "md5_digest": "246b8320d2dbffaa1327b3609a364e9f", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 6229, "upload_time": "2016-01-17T23:45:47", "url": "https://files.pythonhosted.org/packages/2a/5a/2f51dd0e796bef4057ec80640cd949a59779d59078dce3f01763d1991091/pytcga-0.0.4.tar.gz" } ] }