{ "info": { "author": "Nick Clark ", "author_email": "", "bugtrack_url": null, "classifiers": [], "description": "Pyriandx\n========================\n\nPyriandx is an API library for PierianDx genomic web services. \n\n## Getting started\n\nPyriandx can be used as a CLI tool OR a library. Oooh fancy!\n\n### Using the CLI\n\nTL;DR\n\n```\npyriandx --username oldmate@fullysickinstitutiion.com.gov.edu.au --password h4x0r --institution institution-name --json case-file.json my-cool-vcf.vcf\n```\n\nExample `case-file.json` is in `pyriandx/json/create_case.json`.\n\n\n```\nPierianDX API client ::: API wrapper for PierianDx web services\n\nUsage: \n pyriandx [-hxv] [--username ] [--password ] [--output-dir ] --institution --json \n\nOptions:\n -h, --help Prints this help and exit\n -v, --version Prints the version and exits\n -b, --base_url Base URL for PierianDX service [default: https://app.uat.pieriandx.com/cgw-api/v2.0.0].\n -u, --username=username Username for PierianDX service, usually an email address. Overrides environment if it exists.\n -p, --password=password Password for PierianDX service. Overrides environment if it exists.\n -j, --json JSON file with details for target\n -i, --institution=institution Institution to use for API authentication\n -o, --output-dir=output-dir Directory to place downloaded reports. [default: output]\n -x, --verbose Make output more verbose innit\n\n\nEnvironment variables:\n DEBUG_HTTP If defined, prints verbose information for all http transactions\n USERNAME If defined, uses this as username for authenticating to PierianDX\n PASSWORD If defined, uses this as password for authenticating to PierianDX\n BASE_URL If defined, uses this as base URL for PierianDX service\n```\n\n\n### Using as a module\nCheck the `examples/` folder for some sweet example code. \n\n\n", "description_content_type": "text/markdown", "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/umccr/pyriandx", "keywords": "", "license": "", "maintainer": "", "maintainer_email": "", "name": "pyriandx", "package_url": "https://pypi.org/project/pyriandx/", "platform": "", "project_url": "https://pypi.org/project/pyriandx/", "project_urls": { "Homepage": "https://github.com/umccr/pyriandx" }, "release_url": "https://pypi.org/project/pyriandx/0.1.13/", "requires_dist": [ "requests", "docopt", "setuptools", "coloredlogs" ], "requires_python": "", "summary": "API wrapper for PierianDx web services", "version": "0.1.13" }, "last_serial": 5101409, "releases": { "0.1.13": [ { "comment_text": "", "digests": { "md5": "9cab5ef0e9bcfdeca759d1152e9eec3c", "sha256": "358bec30c8bf67a552121609d6d4d1e953fad67239634ba0b36b67562a766163" }, "downloads": -1, "filename": "pyriandx-0.1.13-py3-none-any.whl", "has_sig": false, "md5_digest": "9cab5ef0e9bcfdeca759d1152e9eec3c", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": null, "size": 9974, "upload_time": "2019-04-04T23:38:05", "url": "https://files.pythonhosted.org/packages/e0/60/a1689f1bc3462e0352aede6c24ec0682d636e320abd40ce4e1f67468c389/pyriandx-0.1.13-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "bacb96a89d049d4d144f5970c283f5f8", "sha256": "aabda9c76987f05ed213e00aa85e5b9330f887162214f8fc750e475ce98866b1" }, "downloads": -1, "filename": "pyriandx-0.1.13.tar.gz", "has_sig": false, "md5_digest": "bacb96a89d049d4d144f5970c283f5f8", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 7288, "upload_time": "2019-04-04T23:38:07", "url": "https://files.pythonhosted.org/packages/50/b0/34b496bd0c25faf10e01a6871d932248023b21f9fc1db28b06b1c94e0945/pyriandx-0.1.13.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "9cab5ef0e9bcfdeca759d1152e9eec3c", "sha256": "358bec30c8bf67a552121609d6d4d1e953fad67239634ba0b36b67562a766163" }, "downloads": -1, "filename": "pyriandx-0.1.13-py3-none-any.whl", "has_sig": false, "md5_digest": "9cab5ef0e9bcfdeca759d1152e9eec3c", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": null, "size": 9974, "upload_time": "2019-04-04T23:38:05", "url": "https://files.pythonhosted.org/packages/e0/60/a1689f1bc3462e0352aede6c24ec0682d636e320abd40ce4e1f67468c389/pyriandx-0.1.13-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "bacb96a89d049d4d144f5970c283f5f8", "sha256": "aabda9c76987f05ed213e00aa85e5b9330f887162214f8fc750e475ce98866b1" }, "downloads": -1, "filename": "pyriandx-0.1.13.tar.gz", "has_sig": false, "md5_digest": "bacb96a89d049d4d144f5970c283f5f8", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 7288, "upload_time": "2019-04-04T23:38:07", "url": "https://files.pythonhosted.org/packages/50/b0/34b496bd0c25faf10e01a6871d932248023b21f9fc1db28b06b1c94e0945/pyriandx-0.1.13.tar.gz" } ] }