{ "info": { "author": "", "author_email": "scaramallion@users.noreply.github.com", "bugtrack_url": null, "classifiers": [ "Development Status :: 5 - Production/Stable", "Intended Audience :: Developers", "Intended Audience :: Healthcare Industry", "Intended Audience :: Science/Research", "License :: OSI Approved :: MIT License", "Natural Language :: English", "Operating System :: OS Independent", "Programming Language :: Python :: 2.7", "Programming Language :: Python :: 3.4", "Programming Language :: Python :: 3.5", "Programming Language :: Python :: 3.6", "Topic :: Scientific/Engineering :: Medical Science Apps.", "Topic :: Software Development :: Libraries" ], "description": ".. class:: center\n.. image:: https://codecov.io/gh/pydicom/pynetdicom/branch/master/graph/badge.svg\n :target: https://codecov.io/gh/pydicom/pynetdicom\n.. image:: https://travis-ci.org/pydicom/pynetdicom.svg?branch=master\n :target: https://travis-ci.org/pydicom/pynetdicom\n.. image:: https://circleci.com/gh/pydicom/pynetdicom/tree/master.svg?style=shield\n :target: https://circleci.com/gh/pydicom/pynetdicom/tree/master\n.. image:: https://badge.fury.io/py/pynetdicom.svg\n :target: https://badge.fury.io/py/pynetdicom\n.. image:: https://img.shields.io/pypi/pyversions/pynetdicom.svg\n :target: https://img.shields.io/pypi/pyversions/pynetdicom.svg\n.. image:: https://zenodo.org/badge/DOI/10.5281/zenodo.2638736.svg\n :target: https://doi.org/10.5281/zenodo.2638736\n.. image:: https://badges.gitter.im/pydicom.png\n :target: https://gitter.im/pydicom/Lobby\n\n\npynetdicom\n==========\n\nA Python implementation of the `DICOM `_\nnetworking protocol, originally based on (legacy)\n`pynetdicom `_.\n\n\nDescription\n-----------\n\n`DICOM `_ is the international standard for medical\nimages and related information. It defines the formats and communication\nprotocols for media exchange in radiology, cardiology, radiotherapy and other\nmedical domains.\n\n*pynetdicom* is a pure Python (2.7/3.4+) package that implements the DICOM\nnetworking protocol. Working with `pydicom `_,\nit allows the easy creation of DICOM *Service Class Users* (SCUs) and\n*Service Class Providers* (SCPs).\n\nThe main user class is ``AE``, which is used to represent a DICOM Application\nEntity. Once an ``AE`` has been created you would typically either:\n\n- Start the application as an SCP by specifying the presentation contexts that\n you will support, then calling ``AE.start_server((host, port))`` and waiting\n for incoming association requests\n- Use the application as an SCU by specifying the presentation contexts you\n want the peer SCP to support, then requesting an association\n via the ``AE.associate(host, port)`` method, which returns an ``Association``\n thread.\n\nOnce the application is associated with a peer AE, DICOM data can be sent between\nthem by utilising the DIMSE-C and -N services (see the DICOM Standard Part 7,\nSections `7.5 `_,\n`9 `_,\nand `10 `_).\n\n\nSupported Service Classes\n~~~~~~~~~~~~~~~~~~~~~~~~~\n*pynetdicom* supports the following DICOM service classes:\n\n- `Application Event Logging Service Class `_\n- `Basic Worklist Management Service Class `_\n- `Color Palette Query/Retrieve Service Class `_\n- `Defined Procedure Protocol Query/Retrieve Service Class `_\n- `Display System Management Service Class `_\n- `Hanging Protocol Query/Retrieve Service Class `_\n- `Implant Template Query/Retrieve Service Class `_\n- `Instance Availability Notification Service Class `_\n- `Media Creation Management Service Class `_\n- `Modality Performed Procedure Step Management `_\n- `Non-Patient Object Storage Service Class `_\n- `Print Management Service Class `_\n- `Protocol Approval Query/Retrieve Service Class `_\n- `Query/Retrieve Service Class `_\n\n - `Composite Instance Retrieve Without Bulk Data `_\n - `Instance and Frame Level Retrieve `_\n- `Relevant Patient Information Query Service Class `_\n- `RT Machine Verification Service Class `_\n- `Storage Service Class `_\n\n - `Ophthalmic Refractive Measurements Storage `_\n - `Softcopy Presentation State Storage `_\n - `Structured Reporting Storage `_\n - `Volumetric Presentation State Storage `_\n- `Storage Commitment Service Class `_\n- `Substance Administration Query Service Class `_\n- `Unified Procedure Step Service Class `_\n- `Verification Service Class `_\n\n\nSupported DIMSE SCU Services\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\nWhen the AE is acting as an SCU and an association has been established with a\npeer SCP, the following DIMSE-C and -N services are available (provided the\npeer supports the Service Class and a corresponding Presentation Context has\nbeen accepted):\n\n.. _send_c_echo: https:pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom.association.Association.html#pynetdicom.association.Association.send_c_echo\n.. _send_c_find: https:pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom.association.Association.html#pynetdicom.association.Association.send_c_find\n.. _send_c_get: https:pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom.association.Association.html#pynetdicom.association.Association.send_c_get\n.. _send_c_move: https:pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom.association.Association.html#pynetdicom.association.Association.send_c_move\n.. _send_c_store: https:pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom.association.Association.html#pynetdicom.association.Association.send_c_store\n.. _send_n_action: https:pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom.association.Association.html#pynetdicom.association.Association.send_n_action\n.. _send_n_create: https:pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom.association.Association.html#pynetdicom.association.Association.send_n_create\n.. _send_n_delete: https:pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom.association.Association.html#pynetdicom.association.Association.send_n_delete\n.. _send_n_event_report: https:pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom.association.Association.html#pynetdicom.association.Association.send_n_event_report\n.. _send_n_get: https:pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom.association.Association.html#pynetdicom.association.Association.send_n_get\n.. _send_n_set: https:pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom.association.Association.html#pynetdicom.association.Association.send_n_set\n\n+----------------+----------------------------------------------------------+\n| DIMSE service | ``Association`` method |\n+================+==========================================================+\n| C-ECHO | ``send_c_echo()`` |\n| | |\n+----------------+----------------------------------------------------------+\n| C-FIND | ``send_c_find(dataset, query_model)`` |\n| | |\n+----------------+----------------------------------------------------------+\n| C-GET | ``send_c_get(dataset, query_model)`` |\n| | |\n+----------------+----------------------------------------------------------+\n| C-MOVE | ``send_c_move(dataset, move_aet, query_model)`` |\n| | |\n+----------------+----------------------------------------------------------+\n| C-STORE | ``send_c_store(dataset)`` |\n| | |\n+----------------+----------------------------------------------------------+\n| N-ACTION | ``send_n_action(dataset, action_type, class_uid, |\n| | instance_uid)`` |\n+----------------+----------------------------------------------------------+\n| N-CREATE | ``send_n_create(dataset, class_uid, instance_uid)`` |\n| | |\n+----------------+----------------------------------------------------------+\n| N-DELETE | ``send_n_delete(class_uid, instance_uid)`` |\n| | |\n+----------------+----------------------------------------------------------+\n| N-EVENT-REPORT | ``send_n_event_report(dataset, event_type, |\n| | class_uid, instance_uid)`` |\n+----------------+----------------------------------------------------------+\n| N-GET | ``send_n_get(identifier_list, class_uid, instance_uid)`` |\n| | |\n+----------------+----------------------------------------------------------+\n| N-SET | ``send_n_set(dataset, class_uid, instance_uid)`` |\n| | |\n+----------------+----------------------------------------------------------+\n\nWhere *dataset* is a pydicom\n`Dataset `_\nobject, *query_model* is a UID string, *identifier_list* is a list of pydicom\n`Tag `_\nobjects, *event_type* and *action_type* are ints and *class_uid* and\n*instance_uid* are UID strings. See the\n`Association documentation `_\nfor more information.\n\n\nSupported DIMSE SCP Services\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n\nWhen the AE is acting as an SCP the following DIMSE-C and -N services are\navailable to the peer once an association has been established:\n\n.. _handle_echo: https://pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom._handlers.doc_handle_echo.html\n.. _handle_find: https://pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom._handlers.doc_handle_find.html\n.. _handle_c_get: https://pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom._handlers.doc_handle_c_get.html\n.. _handle_move: https://pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom._handlers.doc_handle_move.html\n.. _handle_store: https://pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom._handlers.doc_handle_store.html\n.. _handle_action: https://pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom._handlers.doc_handle_action.html\n.. _handle_create: https://pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom._handlers.doc_handle_create.html\n.. _handle_delete: https://pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom._handlers.doc_handle_delete.html\n.. _handle_event_report: https://pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom._handlers.doc_handle_event_report.html\n.. _handle_n_get: https://pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom._handlers.doc_handle_n_get.html\n.. _handle_set: https://pydicom.github.io/pynetdicom/stable/reference/generated/pynetdicom._handlers.doc_handle_set.html\n\n+----------------+----------------------------+\n| DIMSE service | Intervention Event |\n+================+============================+\n| C-ECHO | ``evt.EVT_C_ECHO`` |\n+----------------+----------------------------+\n| C-FIND | ``evt.EVT_C_FIND`` |\n+----------------+----------------------------+\n| C-GET | ``evt.EVT_C_GET`` |\n+----------------+----------------------------+\n| C-MOVE | ``evt.EVT_C_MOVE`` |\n+----------------+----------------------------+\n| C-STORE | ``evt.EVT_C_STORE`` |\n+----------------+----------------------------+\n| N-ACTION | ``evt.EVT_N_ACTION`` |\n+----------------+----------------------------+\n| N-CREATE | ``evt.EVT_N_CREATE`` |\n+----------------+----------------------------+\n| N-DELETE | ``evt.EVT_N_DELETE`` |\n+----------------+----------------------------+\n| N-EVENT-REPORT | ``evt.EVT_N_EVENT_REPORT`` |\n+----------------+----------------------------+\n| N-GET | ``evt.EVT_N_GET`` |\n+----------------+----------------------------+\n| N-SET | ``evt.EVT_N_SET`` |\n+----------------+----------------------------+\n\n\nWith the exception of the C-ECHO service, a user-defined callable function,\n*handler*, must be bound to the corresponding\n`intervention event `_\nin order to complete a DIMSE service request. Events\ncan be imported with ``from pynetdicom import evt`` and a handler can be\nbound to an event prior to starting an association through the *evt_handlers*\nkeyword arguments in ``AE.start_server()`` and ``AE.associate()``.\n\nWhen an event occurs the *handler* function is called and passed a single\nparameter, *event*, which is an ``evt.Event`` object whose specific attributes\nare dependent on the type of event that occurred. Handlers bound to\nintervention events must return or yield certain values. See the\n`handler documentation `_\nfor information on what attributes and properties are available in ``Event``\nfor each event type and the expected returns/yields for the\ncorresponding handlers.\n\n\nDocumentation\n-------------\nThe *pynetdicom*\n`user guide `_,\n`code examples `_ and\n`API reference `_\ndocumentation is available for the\n`current release `_ as well as the\n`development version `_.\n\n\nInstallation\n------------\nDependencies\n~~~~~~~~~~~~\n`pydicom `_\n\nInstalling current release\n~~~~~~~~~~~~~~~~~~~~~~~~~~\n.. code-block:: sh\n\n $ pip install pynetdicom\n\nInstalling development version\n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~\n.. code-block:: sh\n\n $ pip install git+git://github.com/pydicom/pynetdicom.git\n\nExamples\n--------\nSend a DICOM C-ECHO to a peer Verification SCP (at TCP/IP address *addr*,\nlisten port number *port*):\n\n.. code-block:: python\n\n from pynetdicom import AE\n\n ae = AE(ae_title=b'MY_ECHO_SCU')\n # Verification SOP Class has a UID of 1.2.840.10008.1.1\n # we can use the UID string directly when requesting the presentation\n # contexts we want to use in the association\n ae.add_requested_context('1.2.840.10008.1.1')\n\n # Associate with a peer DICOM AE\n assoc = ae.associate(addr, port)\n\n if assoc.is_established:\n # Send a DIMSE C-ECHO request to the peer\n # `status` is a pydicom Dataset object with (at a minimum) a\n # (0000,0900) Status element\n # If the peer hasn't accepted the requested context then this\n # will raise a RuntimeError exception\n status = assoc.send_c_echo()\n\n # Output the response from the peer\n if status:\n print('C-ECHO Response: 0x{0:04x}'.format(status.Status))\n\n # Release the association\n assoc.release()\n\nCreate a blocking DICOM C-ECHO listen SCP on port 11112 (you may optionally\nbind a handler to the ``evt.EVT_C_ECHO`` event if you want to return something\nother than a *Success* status):\n\n.. code-block:: python\n\n from pynetdicom import AE, VerificationPresentationContexts\n\n ae = AE(ae_title=b'MY_ECHO_SCP')\n # Or we can use the inbuilt VerificationPresentationContexts list,\n # there's one for each of the supported Service Classes\n # In this case, we are supporting any requests to use Verification SOP\n # Class in the association\n ae.supported_contexts = VerificationPresentationContexts\n\n # Start the SCP on (host, port) in blocking mode\n ae.start_server(('', 11112), block=True)\n\nAlternatively, you can start the SCP in non-blocking mode, which returns the\nrunning server instance. This can be useful when you want to run a Storage SCP\nand make C-MOVE requests within the same AE. In the next example we'll create a\nnon-blocking Verification SCP and bind a handler for the C-ECHO service\nrequest event ``evt.EVT_C_ECHO`` that logs the requestor's address and port\nnumber and the timestamp for the event.\n\n.. code-block:: python\n\n import logging\n\n from pynetdicom import AE, evt, VerificationPresentationContexts, debug_logger\n\n # Setup logging to use the StreamHandler at the debug level\n debug_logger()\n LOGGER = logging.getLogger('pynetdicom')\n\n ae = AE(ae_title=b'MY_ECHO_SCP')\n ae.supported_contexts = VerificationPresentationContexts\n\n # Implement the EVT_C_ECHO handler\n def handle_echo(event):\n \"\"\"Handle a C-ECHO service request.\n\n Parameters\n ----------\n event : evt.Event\n The C-ECHO service request event.\n\n Returns\n -------\n int or pydicom.dataset.Dataset\n The status returned to the peer AE in the C-ECHO response.\n Must be a valid C-ECHO status value as either an ``int`` or a\n ``Dataset`` object containing an (0000,0900) *Status* element.\n \"\"\"\n # Every *Event* includes `assoc` and `timestamp` attributes\n # which are the *Association* instance the event occurred in\n # and the *datetime.datetime* the event occurred at\n requestor = event.assoc.requestor\n timestamp = event.timestamp.strftime(\"%Y-%m-%d %H:%M:%S\")\n msg = (\n \"Received C-ECHO service request from ({}, {}) at {}\"\n .format(requestor.address, requestor.port, timestamp)\n )\n LOGGER.info(msg)\n\n # Return a *Success* status\n return 0x0000\n\n handlers = [(evt.EVT_C_ECHO, handle_echo)]\n\n # Start the SCP in non-blocking mode\n scp = ae.start_server(('', 11112), block=False, evt_handlers=handlers)\n\n # Send a C-ECHO request to our own Verification SCP\n ae.add_requested_context('1.2.840.10008.1.1')\n assoc = ae.associate('localhost', 11112)\n if assoc.is_established:\n status = assoc.send_c_echo()\n assoc.release()\n\n # Shutdown the SCP\n scp.shutdown()\n\n\nSend the DICOM *CT Image Storage* dataset in *file-in.dcm* to a peer Storage\nSCP (at TCP/IP address *addr*, listen port number *port*):\n\n.. code-block:: python\n\n from pydicom import dcmread\n from pydicom.uid import ImplicitVRLittleEndian\n\n from pynetdicom import AE, VerificationPresentationContexts\n from pynetdicom.sop_class import CTImageStorage, MRImageStorage\n\n ae = AE(ae_title=b'MY_STORAGE_SCU')\n # We can also do the same thing with the requested contexts\n ae.requested_contexts = VerificationPresentationContexts\n # Or we can use inbuilt objects like CTImageStorage.\n # The requested presentation context's transfer syntaxes can also\n # be specified using a str/UID or list of str/UIDs\n ae.add_requested_context(CTImageStorage,\n transfer_syntax=ImplicitVRLittleEndian)\n # Adding a presentation context with multiple transfer syntaxes\n ae.add_requested_context(MRImageStorage,\n transfer_syntax=[ImplicitVRLittleEndian,\n '1.2.840.10008.1.2.1'])\n\n assoc = ae.associate(addr, port)\n if assoc.is_established:\n dataset = dcmread('file-in.dcm')\n # 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