{ "info": { "author": "Ajayrama Kumaraswamy, Justas Birgiolas", "author_email": "justas@asu.edu", "bugtrack_url": null, "classifiers": [ "License :: OSI Approved :: Apache Software License", "Operating System :: OS Independent", "Programming Language :: Python :: 3" ], "description": "[![Build Status](https://travis-ci.com/JustasB/pylmeasure.svg?branch=master)](https://travis-ci.com/JustasB/pylmeasure)\n[![codecov](https://codecov.io/gh/JustasB/pylmeasure/branch/master/graph/badge.svg)](https://codecov.io/gh/JustasB/pylmeasure)\n[![PyPI version](https://badge.fury.io/py/pylmeasure.svg)](https://badge.fury.io/py/pylmeasure)\n\n# PyLMeasure: A Python Wrapper for LMeasure.\n\n[PyLMeasure](https://pypi.org/project/pylmeasure/) is a Python wrapper library for the [command-line interface](http://cng.gmu.edu:8080/Lm/help/cmdLineUsageDoc.html) of the neuronal morphology analysis tool [L-Measure](http://cng.gmu.edu:8080/Lm/help/index.htm).\n\n# Installation\n\nTo install the library, simply type in `pip install pylmeasure` in your terminal.\n\nThe above command includes the necessary binaries -- no need to download L-Measure separatelly or install Java.\n\n# Usage\n\nThe basic usage is:\n\n```\nfrom pylmeasure import *\n\n# Specify the L-Measure to compute, full list: http://cng.gmu.edu:8080/Lm/help/index.htm\nLMOutput = getOneMeasure('Surface', 'path/to/cell.swc')\n\nprint(\"Surface area:\", LMOutput[\"TotalSum\"])\n```\n\nFor more examples, see [this Jupyter notebook](https://github.com/JustasB/pylmeasure/blob/master/PyLMeasure%20Usage.ipynb).\n\n# Issues\nIf you encounter an issue, first make sure it's not due to L-Measure itself -- this library simply wraps the L-Measure executables. If it is, please contact the [L-Measure team](http://cng.gmu.edu:8080/Lm/). If the issue is with this library, please create an [issue on Github](https://github.com/JustasB/pylmeasure/issues).\n\n# Contributing\n\nTo contribute, please [open an issue](https://github.com/JustasB/pylmeasure/issues) first and discuss your plan for contributing. Then fork this repository and commit [a pull-request](https://help.github.com/en/articles/about-pull-requests) with your changes.\n\n# Acknowledgements\n\nThis wrapper library project was initialy started by [Ajayrama Kumaraswamy](https://github.com/ajkswamy). 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