{
    "info": {
        "author": "Anthony Aylward",
        "author_email": "aaylward@eng.ucsd.edu",
        "bugtrack_url": null,
        "classifiers": [
            "License :: OSI Approved :: MIT License",
            "Operating System :: OS Independent",
            "Programming Language :: Python :: 3"
        ],
        "description": "# py1kgp\n\nUtilities for working with 1000 Genomes data\n\n## Installation\n\nFirst make sure you have followed the installation procedure for\n[pydbsnp](https://github.com/anthony-aylward/pydbsnp). Then install `py1kgp`\nwith `pip3`:\n\n```sh\npip3 install py1kgp\n```\nor\n```sh\npip3 install --user py1kgp\n```\n\nFor full functionality, you should appropriately set the environment variable\n`PY1KGP_DIR`. For example, you could add this to your `.bash_profile`:\n\n```bash\nexport PY1KGP_DIR=<path to directory of your choice>\n```\n\n## Examples\n\n```python\nimport py1kgp\npy1kgp.Variant('rs10')\npy1kgp.Variant(id='rs10')\npy1kgp.Variant(7, 92383888)\npy1kgp.Variant(chrom=7, pos=92383888)\npy1kgp.fast_genotypes(7, 92383888)\npy1kgp.fast_genotypes(7, 92383888, samples='NA21142,NA21143,NA21144')\npy1kgp.fast_maf(7, 92383888)\npy1kgp.slice_vcf(1, 1000000, 2000000)\npy1kgp.slice_vcf(1, 1000000, 2000000, samples='NA21142,NA21143,NA21144')\npy1kgp.slice_vcf(1, 1000000, 2000000, samples='AFR')\npy1kgp.slice_vcf(1, 1000000, 2000000, samples='samples.panel')\n```\n\n",
        "description_content_type": "text/markdown",
        "docs_url": null,
        "download_url": "",
        "downloads": {
            "last_day": -1,
            "last_month": -1,
            "last_week": -1
        },
        "home_page": "https://github.com/anthony-aylward/py1kgp.git",
        "keywords": "",
        "license": "",
        "maintainer": "",
        "maintainer_email": "",
        "name": "py1kgp",
        "package_url": "https://pypi.org/project/py1kgp/",
        "platform": "",
        "project_url": "https://pypi.org/project/py1kgp/",
        "project_urls": {
            "Homepage": "https://github.com/anthony-aylward/py1kgp.git"
        },
        "release_url": "https://pypi.org/project/py1kgp/0.1.1/",
        "requires_dist": [
            "pyhg19"
        ],
        "requires_python": "",
        "summary": "Utilities for working with 1000 Genomes data",
        "version": "0.1.1"
    },
    "last_serial": 5469627,
    "releases": {
        "0.1.0": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "968330e4dc5a5e2fb4090f842ebd4cdf",
                    "sha256": "6f418671e420e15f3f945cb1fc2184ee523aad7e3ec4d5c559ddf19f0a04d5b9"
                },
                "downloads": -1,
                "filename": "py1kgp-0.1.0-py3-none-any.whl",
                "has_sig": false,
                "md5_digest": "968330e4dc5a5e2fb4090f842ebd4cdf",
                "packagetype": "bdist_wheel",
                "python_version": "py3",
                "requires_python": null,
                "size": 5549,
                "upload_time": "2019-06-29T23:37:17",
                "url": "https://files.pythonhosted.org/packages/02/c0/10039ef1707cc1cdb1a1cbeb3a2466bfa96f726cfaec1cdd5da9b9622614/py1kgp-0.1.0-py3-none-any.whl"
            },
            {
                "comment_text": "",
                "digests": {
                    "md5": "ae064814ed3c50f5f8b09d9cbb601e1c",
                    "sha256": "cd374b0983ab0fd95379cf9ec153f23a53df05b1547e5202464ab0fb11faf778"
                },
                "downloads": -1,
                "filename": "py1kgp-0.1.0.tar.gz",
                "has_sig": false,
                "md5_digest": "ae064814ed3c50f5f8b09d9cbb601e1c",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 4224,
                "upload_time": "2019-06-29T23:37:20",
                "url": "https://files.pythonhosted.org/packages/fe/46/c782918de602d964a3191dd53b068040745e8a81efc55ae3bdfb08cf247e/py1kgp-0.1.0.tar.gz"
            }
        ],
        "0.1.1": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "93751f6b14eb68b8dfc9ac9af73a5571",
                    "sha256": "05f6c7ca42b79d0afa4dac12caa711dc554eb1ec867c6ca61c2a3785d697f524"
                },
                "downloads": -1,
                "filename": "py1kgp-0.1.1-py3-none-any.whl",
                "has_sig": false,
                "md5_digest": "93751f6b14eb68b8dfc9ac9af73a5571",
                "packagetype": "bdist_wheel",
                "python_version": "py3",
                "requires_python": null,
                "size": 5536,
                "upload_time": "2019-07-01T04:52:27",
                "url": "https://files.pythonhosted.org/packages/6e/d6/4c6b649b843cccd9c42d34d917d4d08062a1626fbab82ff64a3753bc1ded/py1kgp-0.1.1-py3-none-any.whl"
            },
            {
                "comment_text": "",
                "digests": {
                    "md5": "bdba0add56c574939b87a78b15b74bfa",
                    "sha256": "0996d27c31747701571ef3dce1387005bb4b1375f1b838efd35de6626da27297"
                },
                "downloads": -1,
                "filename": "py1kgp-0.1.1.tar.gz",
                "has_sig": false,
                "md5_digest": "bdba0add56c574939b87a78b15b74bfa",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 4222,
                "upload_time": "2019-07-01T04:52:29",
                "url": "https://files.pythonhosted.org/packages/26/2e/afbbe42ea2b32d347f6df3e452afd59da3071485d923ec76a09b9414629d/py1kgp-0.1.1.tar.gz"
            }
        ]
    },
    "urls": [
        {
            "comment_text": "",
            "digests": {
                "md5": "93751f6b14eb68b8dfc9ac9af73a5571",
                "sha256": "05f6c7ca42b79d0afa4dac12caa711dc554eb1ec867c6ca61c2a3785d697f524"
            },
            "downloads": -1,
            "filename": "py1kgp-0.1.1-py3-none-any.whl",
            "has_sig": false,
            "md5_digest": "93751f6b14eb68b8dfc9ac9af73a5571",
            "packagetype": "bdist_wheel",
            "python_version": "py3",
            "requires_python": null,
            "size": 5536,
            "upload_time": "2019-07-01T04:52:27",
            "url": "https://files.pythonhosted.org/packages/6e/d6/4c6b649b843cccd9c42d34d917d4d08062a1626fbab82ff64a3753bc1ded/py1kgp-0.1.1-py3-none-any.whl"
        },
        {
            "comment_text": "",
            "digests": {
                "md5": "bdba0add56c574939b87a78b15b74bfa",
                "sha256": "0996d27c31747701571ef3dce1387005bb4b1375f1b838efd35de6626da27297"
            },
            "downloads": -1,
            "filename": "py1kgp-0.1.1.tar.gz",
            "has_sig": false,
            "md5_digest": "bdba0add56c574939b87a78b15b74bfa",
            "packagetype": "sdist",
            "python_version": "source",
            "requires_python": null,
            "size": 4222,
            "upload_time": "2019-07-01T04:52:29",
            "url": "https://files.pythonhosted.org/packages/26/2e/afbbe42ea2b32d347f6df3e452afd59da3071485d923ec76a09b9414629d/py1kgp-0.1.1.tar.gz"
        }
    ]
}