{
    "info": {
        "author": "M\u00e5ns Magnusson",
        "author_email": "mans.magnusson@scilifelab.se",
        "bugtrack_url": null,
        "classifiers": [
            "Development Status :: 4 - Beta",
            "Environment :: Console",
            "Intended Audience :: Developers",
            "License :: OSI Approved :: MIT License",
            "Programming Language :: Python :: 3",
            "Programming Language :: Python :: 3.3",
            "Programming Language :: Python :: 3.4",
            "Programming Language :: Python :: 3.5",
            "Topic :: Software Development"
        ],
        "description": "# phizz-genes #\n\nA small django app to represent genes, transcripts, omim phenotypes, aliases etc\n\n## Instructions ##\n\n- Add phizz-genes to your INSTALLED_APPS settings like:\n\n ```python\n INSTALLED_APPS = [\n    ...\n    'genes',\n ]\n ```\n\n- Run `python manage.py migrate` to create the models\n\n\n## Models ##\n\n```python\nclass Gene(models.Model):\n\n    #The ensembl gene id, ex. 'ENSG00000156110'\n    #can be use with link like:\n    #ensembl.org/Homo_sapiens/Gene/Summary?g=ENSG00000156110\n    ensembl_id = models.CharField(max_length=20)\n\n    chrom = models.CharField(max_length=30)\n    start = models.IntegerField()\n    stop = models.IntegerField()\n\n    #The hgnc symbol, ex. 'ADK\n    hgnc_symbol = models.CharField(max_length=20, blank=True)\n\n    description = models.CharField(max_length=200, null=True)\n    #The hgnc id, ex. '257' for using link like:\n    #genenames.org/cgi-bin/gene_symbol_report?hgnc_id=HGNC:257\n    hgnc_id = models.IntegerField(null=True)\n\n    #entrez id, ex. 132, for using link like:\n    #ncbi.nlm.nih.gov/gene/132\n    entrez_id = models.IntegerField(null=True)\n\n    #vega id, ex. OTTHUMG00000018506, for using link like:\n    #http://vega.sanger.ac.uk/Homo_sapiens/Gene/Summary?db=core;g=OTTHUMG00000018506\n    vega_id = models.CharField(max_length=20, null=True)\n\n    #ucsc id, ex. uc001jwi.4, for using link like:\n    #http://genome.cse.ucsc.edu/cgi-bin/hgGene?org=Human&hgg_chrom=none&hgg_type=knownGene&hgg_gene=uc001jwi.4\n    ucsc_id = models.CharField(max_length=20, null=True)\n\n    #pli_score is the estimated sensibility to lof mutations estimated by ExAC\n    pli_score = models.DecimalField(max_digits=6, decimal_places=5, null=True)\n\n    def __str__(self):\n        return self.hgnc_symbol\n\n#One gene can have several transcripts, one transcript are attached to one gene\nclass Transcript(models.Model):\n    gene = models.ForeignKey(Gene, on_delete=models.CASCADE)\n    refseq_name = models.CharField(max_length=30, null=True)\n    ensembl_transcript_id = models.CharField(max_length=30)\n\n    def __str__(self):\n        return self.refseq_name\n\n#One phenotype can have several transcripts, one transcript are attached to one gene\nclass Omim(models.Model):\n    gene = models.ForeignKey(Gene, on_delete=models.CASCADE)\n    omim_id = models.IntegerField()\n\nclass Alias(models.Model):\n    gene = models.ForeignKey(Gene, on_delete=models.CASCADE)\n    alias = models.CharField(max_length=20)\n\nclass UniProt(models.Model):\n    gene = models.ForeignKey(Gene, on_delete=models.CASCADE)\n    uniprot_id = models.CharField(max_length=20)\n```",
        "description_content_type": null,
        "docs_url": null,
        "download_url": null,
        "downloads": {
            "last_day": -1,
            "last_month": -1,
            "last_week": -1
        },
        "home_page": "https://github.com/moonso/phizz-genes",
        "keywords": "g,e,n,e,s, ,p,h,i,z,z, ,d,e,v,e,l,o,p,m,e,n,t",
        "license": "MIT",
        "maintainer": null,
        "maintainer_email": null,
        "name": "phizz-genes",
        "package_url": "https://pypi.org/project/phizz-genes/",
        "platform": "UNKNOWN",
        "project_url": "https://pypi.org/project/phizz-genes/",
        "project_urls": {
            "Homepage": "https://github.com/moonso/phizz-genes"
        },
        "release_url": "https://pypi.org/project/phizz-genes/0.0.1/",
        "requires_dist": null,
        "requires_python": null,
        "summary": "Small django app to model genes",
        "version": "0.0.1"
    },
    "last_serial": 2370873,
    "releases": {
        "0.0.1": []
    },
    "urls": []
}