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        "author": "Emily Jane B. McTavish and Mark T. Holder",
        "author_email": "UNKNOWN",
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            "Intended Audience :: Developers",
            "Intended Audience :: Science/Research",
            "License :: OSI Approved :: BSD License",
            "Natural Language :: English",
            "Operating System :: OS Independent",
            "Programming Language :: Python :: 2.7",
            "Topic :: Scientific/Engineering :: Bio-Informatics"
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        "description": "peyotl\n======\n\n.. image:: https://raw.githubusercontent.com/OpenTreeOfLife/peyotl/master/doc/peyotl-logo.png\n\n\npeyotl is a python package written to make it easier to\ninteract with the software produced by the `Open Tree of Life project`_.\nSpecifically, to:\n\n1. interact with a local version of the phylesystem_ repository of \n    curated phylogenetic studies ;\n\n2. call web services associated with the studies (served by web app \n    running the `phylesystem api`_ code);\n\n3. call web services associated with taxonomic resolution services\n    (running taxomachine_ );\n\n4. call web services associated with Open Tree of Life's \"synthetic\" estimate\n    of the tree of life (running treemachine_);\n\n5. call web services associated with an annotation database (that\n     we have not built yet)\n\nCurrently peyotl is used to implement most of the functionality in the \n`phylesystem api`_ backend of the study curation tool.\n\nInstructions\n------------\n\n::\n\n    virtualenv pey\n    . pey/bin/activate\n    pip install -r requirements.txt\n    python setup.py develop\n    python setup.py test\n\nperforms the basic installation and test. For full(er) documentation, check out the wiki_.\n\n\nThanks\n------\n\nThanks to NSF_ and HITS_ for funding support.\n\npeyotl is primarily written by Mark Holder, Emily Jane McTavish, and Jim Allman, \nbut see the CONTRIBUTORS_ file for a more complete list\nof people who have contributed code.\n\nThe fabulous `Karl Gude`_ created the logo.\n\nSeveral parts of the setup.py, logging, documentation, and test suite were \nbased on Jeet Sukumraran's work in the DendroPy_ package.\n\nThe sortattr.xslt stylesheet (which is only used in round-trip testing) is from \n   http://stackoverflow.com/questions/1429991/using-xsl-to-sort-attributes\n\nThe peyotl.phylesystem.git_actions (and the tests) were a part of the api.opentreeoflife.org\n    repo which was primarily the work of Duke Leto (at that time).\n\nJim Allman, Karen Cranston, Cody Hinchliff, Mark Holder, Peter Midford, and Jonathon Rees\nall participated in the discussions that led to the NexSON mapping.\n\nThe peyotl/test/data/nexson/phenoscape/nexml test file is from\n    https://raw.github.com/phenoscape/phenoscape-data/master/Curation%20Files/completed-phenex-files/Characiformes/Buckup_1998.xml\n    Phenoscape file (download), NESCent_ [Feb 16, 2014] The citation for the data is in the nexml doc itself.\n\n****************\n\n*Etymology*: According to Wikipedia, peyotl is the Nahuatl word for `Lophophora williamsii`_.\n\n.. _Open Tree of Life project: http://blog.opentreeoflife.org/\n.. _phylesystem: https://github.com/OpenTreeOfLife/phylesystem\n.. _phylesystem api: https://github.com/OpenTreeOfLife/api.opentreeoflife.org/\n.. _taxomachine: https://github.com/OpenTreeOfLife/taxomachine\n.. _treemachine:  https://github.com/OpenTreeOfLife/treemachine\n.. _CONTRIBUTORS: https://raw.githubusercontent.com/OpenTreeOfLife/peyotl/master/CONTRIBUTORS.txt\n.. _wiki: https://github.com/OpenTreeOfLife/peyotl/wiki\n.. _Karl Gude: http://karlgude.com/about/\n.. _DendroPy: http://pythonhosted.org/DendroPy/\n.. _Lophophora williamsii: http://en.wikipedia.org/wiki/Lophophora_williamsii\n.. _NSF: http://www.nsf.gov\n.. _HITS: http://www.h-its.org/english\n.. _NESCent: http://kb.phenoscape.org",
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        "license": "BSD",
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        "name": "peyotl",
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