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        "author": "Pierre Poulain",
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            "License :: OSI Approved :: MIT License",
            "Programming Language :: Python :: 2",
            "Programming Language :: Python :: 2.7",
            "Programming Language :: Python :: 3",
            "Programming Language :: Python :: 3.4",
            "Programming Language :: Python :: 3.5",
            "Programming Language :: Python :: 3.6",
            "Topic :: Scientific/Engineering :: Bio-Informatics",
            "Topic :: Scientific/Engineering :: Chemistry",
            "Topic :: Scientific/Engineering :: Physics"
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        "description": "PBxplore\n========\n\n.. image:: https://img.shields.io/badge/Python-2.7%203.4%203.5%203.6-brightgreen.svg\n    :alt: Python version\n    :target: https://pypi.python.org/pypi/pbxplore\n\n.. image:: https://badge.fury.io/py/pbxplore.svg\n    :alt: PyPI PBxplore version\n    :target: https://pypi.python.org/pypi/pbxplore\n\n.. image:: https://travis-ci.org/pierrepo/PBxplore.svg?branch=master\n    :alt: Travis CI build status\n    :target: https://travis-ci.org/pierrepo/PBxplore\n\n.. image:: https://readthedocs.org/projects/pbxplore/badge/?version=latest\n    :alt: PBxplore documentation\n    :target: https://pbxplore.readthedocs.org/en/latest/\n\n\n**PBxplore** is a suite of tools dedicated to Protein Block (PB) analysis.\nProtein Blocks are structural prototypes defined by\n`de Brevern et al <https://www.ncbi.nlm.nih.gov/pubmed/11025540>`_. The 3-dimensional local\nstructure of a protein backbone can be modelized as an 1-dimensional sequence of PBs.\nIn principle, any conformation of any amino acid could be represented by one of\nthe sixteen available Protein Blocks (see Figure 1).\n\n.. image:: https://raw.githubusercontent.com/pierrepo/PBxplore/master/doc/source/img/PBs.jpg\n    :alt: PBs\n\n**Figure 1.** Schematic representation of the sixteen protein blocks,\nlabeled from *a* to *p* (`Creative commons 4.0 CC-BY <https://creativecommons.org/licenses/by/4.0/>`_).\n\n\nPBxplore provides both a Python library and command-line tools. Basically, PBxplore can:\n\n* **assign PBs** from a single PDB, many PDBs or a molecular dynamics simulation trajectory.\n* use analysis tools to perform **statistical analysis** on PBs.\n* use analysis tools to **study protein flexibility and deformability**.\n\n\nRequirements\n------------\n\nPBxplore requires:\n\n* Python 2.7 or Python 3.x (>= 3.4)\n* Python modules: `NumPy <http://numpy.scipy.org/>`_, `Matplotlib <http://matplotlib.org/>`_, `MDAnalysis <https://code.google.com/p/mdanalysis/>`_ (version >= 0.11).\n\nOptionally, PBxplore can use:\n\n* `WebLogo 3 <http://weblogo.threeplusone.com/>`_ to create logo from PB sequences.\n\n\nInstallation\n------------\n\nOnce dependencies installed, the most straightforward way is to use `pip`:\n\n.. code-block:: bash\n\n    $ pip install pbxplore\n\n\nPBxplore can also be installed for the current user only:\n\n.. code-block:: bash\n\n    $ pip install --user pbxplore\n\n\nDocumentation\n-------------\n\nAll documentation are hosted by Read The Docs and can be found `here <https://pbxplore.readthedocs.org/en/latest/>`_.\n\nContact & Support\n-----------------\n\nPBxplore is a research software and has been developped by:\n\n* Pierre Poulain, \"Mitochondria, Metals and Oxidative Stress\" group, Institut Jacques Monod, UMR 7592, Univ. Paris Diderot, CNRS, Sorbonne Paris Cit\u00e9, France.\n* Jonathan Barnoud, University of Groningen, Groningen, The Netherlands.\n* Hubert Santuz, Laboratoire de Biochimie Th\u00e9orique, CNRS UPR 9080, Institut de Biologie Physico-Chimique, Paris, France.\n* Alexandre G. de Brevern, DSIMB, INSERM, U 1134, INTS, Paris, France.\n\nIf you want to report a bug, request a feature,\nuse the `GitHub issue system <https://github.com/pierrepo/PBxplore/issues>`_.\n\n\nLicense\n-------\n\nPBxplore is licensed under `The MIT License <https://github.com/pierrepo/PBxplore/blob/master/LICENSE>`_.",
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