{ "info": { "author": "Jason Thomas, Samuel J. Clark, & Martin W. Bratschi", "author_email": "jarthomas@gmail.com", "bugtrack_url": null, "classifiers": [ "License :: OSI Approved :: GNU General Public License v3 (GPLv3)", "Operating System :: POSIX :: Linux", "Programming Language :: Python :: 3", "Programming Language :: Python :: 3.5" ], "description": "OpenVA_Pipeline\n===============\n[![image](https://img.shields.io/pypi/v/openva_pipeline.svg)](https://pypi.org/project/openva_pipeline/)\n[![image](http://readthedocs.org/projects/openva-pipeline/badge/)](http://openva-pipeline.readthedocs.io/)\n[![Travis-CI Build Status](https://travis-ci.org/verbal-autopsy-software/openva_pipeline.svg?branch=master)](https://travis-ci.org/verbal-autopsy-software/openva_pipeline)\n\nAutomates the processing of verbal autopsy (VA) data from an ODK Aggregate\nserver, through the openVA Pipeline middleware, and ending with a DHIS2 server\n(with the [VA module](https://github.com/SwissTPH/dhis2_va_draft)). VA data are\nanalyzed using the [openVA\npackage](https://github.com/verbal-autopsy-software/openVA) in **R**, which is\ndemonstrated with code for an RShiny app in the [OpenVA_RShiny\nrepository](https://github.com/verbal-autopsy-software/shinyVA) and described in a\n[vignette](https://github.com/verbal-autopsy-software/shinyVA/blob/master/shiny-openVA-vignette.pdf).\n\n\nThe documentation for the openVA Pipeline can be found at:\n[http://openva-pipeline.readthedocs.io/](http://openva-pipeline.readthedocs.io/)\n\n## Getting Started\n\nThe OpenVA Pipeline has been designed for (and tested on) Ubuntu LTS 16.04.\nThe steps to install and configure the pipeline can be found in\n`docs/setup.md`. To make the installation easier, there is also a bash shell\nscript `install_software_ubuntu16_04.sh` that installs all of the necessary software (the\nscript requires the `sudo` password).\n\n\n\n\n\n\n\n## License\nGNU General Public License v3.0\n\n----\n\n## Licenses for Dependencies (ODK Briefcase and SmartVA-Analyze)\n\nThe openva-pipeline package makes use of two external programs:\n`ODK-Briefcase-v1.12.2.jar` and `smartva`. [ODK Briefcase](https://github.com/opendatakit/briefcase) \nis a tool in the Open Data Kit (ODK) Software Suite, and is open-source software available \nunder the Apache 2.0 license (see \n[ODK_Briefcase_LICENSE](https://github.com/opendatakit/briefcase/blob/master/LICENSE.md).\n`smartva` is an open-source command line interface application for linux (see the \n[SmartVA-Analyze MIT License](https://github.com/ihmeuw/SmartVA-Analyze/blob/master/LICENSE))\nthat is available for download from the\n[ihmeuw/SmartVA-Analyze repository](https://github.com/ihmeuw/SmartVA-Analyze/releases).\n**These applications are NOT included under the same license as the OpenVA Pipeline (GPL-3)**.\n\n\n", "description_content_type": "text/markdown", "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/verbal-autopsy-software/openva_pipeline", "keywords": "", "license": "GPLv3", "maintainer": "", "maintainer_email": "", "name": "openva-pipeline", "package_url": "https://pypi.org/project/openva-pipeline/", "platform": "", "project_url": "https://pypi.org/project/openva-pipeline/", "project_urls": { "Homepage": "https://github.com/verbal-autopsy-software/openva_pipeline" }, "release_url": "https://pypi.org/project/openva-pipeline/0.0.0.9011/", "requires_dist": [ "pandas", "pysqlcipher3", "requests" ], "requires_python": "", "summary": "Automates the processing of verbal autopsy data.", "version": "0.0.0.9011" }, "last_serial": 4779658, "releases": { "0.0.0.9006": [ { "comment_text": "", "digests": { "md5": "ae2cccaee73313d5926a01791e0e6536", "sha256": "d4792f86c6980fa694a1cc65b736f46df3d165b72678c932cb173c3c21c94b27" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9006-py3-none-any.whl", "has_sig": false, "md5_digest": "ae2cccaee73313d5926a01791e0e6536", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": null, "size": 55233162, "upload_time": "2018-10-29T18:54:26", "url": "https://files.pythonhosted.org/packages/5c/f7/667ce1dbc6433ee48238ae517b85cef8647ba7fb444bc07f5c3a788961d4/openva_pipeline-0.0.0.9006-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "7a0c8ecb3d351e9c166bfda271b70052", "sha256": "a667c24cdda27b88da8a47753f7dd0ee0d6f20ef93c1b9634e7e4827340ad73c" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9006.tar.gz", "has_sig": false, "md5_digest": "7a0c8ecb3d351e9c166bfda271b70052", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 55215668, "upload_time": "2018-10-29T18:54:38", "url": "https://files.pythonhosted.org/packages/0c/d5/fc3822dacfcdcaabb3f56ff179907d69e2d896657633f70e6cf6b52ecb12/openva_pipeline-0.0.0.9006.tar.gz" } ], "0.0.0.9007": [ { "comment_text": "", "digests": { "md5": "bf23644ff406ae05643618e3e9d6d94e", "sha256": "9f9c322245d12dd00b63ac2377f0826c6ac9fad69f652d3c699dabf686ac13ac" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9007-py3-none-any.whl", "has_sig": false, "md5_digest": "bf23644ff406ae05643618e3e9d6d94e", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": null, "size": 55384351, "upload_time": "2018-11-01T19:03:20", "url": "https://files.pythonhosted.org/packages/70/18/3df9a2dd3e397b48299ab373e7504dd9d38b0b699505e7cd267a4332937b/openva_pipeline-0.0.0.9007-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "50ae139f12706499c988716bc639beb9", "sha256": "c7ce35b004a611e76571ae8f775237718e589ee37e4ce069b6c030761747c5ea" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9007.tar.gz", "has_sig": false, "md5_digest": "50ae139f12706499c988716bc639beb9", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 55368541, "upload_time": "2018-11-01T19:03:30", "url": "https://files.pythonhosted.org/packages/ad/0b/b480121a6ef628937cda55f824ebec81eb1947f25b6b1401528254e72efb/openva_pipeline-0.0.0.9007.tar.gz" } ], "0.0.0.9008": [ { "comment_text": "", "digests": { "md5": "b5cc85d135f3133d6f6e1defbcb717bf", "sha256": "278d15d6d2cd29768683a1bf4c43669888912172728f6d3b114a20e243074be1" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9008-py3-none-any.whl", "has_sig": false, "md5_digest": "b5cc85d135f3133d6f6e1defbcb717bf", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": null, "size": 327050, "upload_time": "2019-01-17T03:06:46", "url": "https://files.pythonhosted.org/packages/19/2d/f834c8765b1a7966526ea0e6666890fcc9229e5e9ac2f5359cc7077e6d76/openva_pipeline-0.0.0.9008-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "532c9159b3da5ff9a725396fe04fa56e", "sha256": "8d47b5563b91092db4b02751b9b0e747f62d462f9b2474f24bedd5f4382148cb" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9008.tar.gz", "has_sig": false, "md5_digest": "532c9159b3da5ff9a725396fe04fa56e", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 310827, "upload_time": "2019-01-17T03:06:49", "url": "https://files.pythonhosted.org/packages/80/e2/9028ca01d0d5e9b9c22d58f2931796489f0d2d457945643d826389985664/openva_pipeline-0.0.0.9008.tar.gz" } ], "0.0.0.9009": [ { "comment_text": "", "digests": { "md5": "bfbfbe0e96df5c4d3e4b62aa8c33090d", "sha256": "a8cdb2a08fa652857d773f9cd6c9b7b0c20d3deb7a45685df7c455aa40d000bf" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9009-py3-none-any.whl", "has_sig": false, "md5_digest": "bfbfbe0e96df5c4d3e4b62aa8c33090d", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": null, "size": 327070, "upload_time": "2019-01-17T23:04:54", "url": "https://files.pythonhosted.org/packages/4b/f9/1d2a0d83c0c4023a869481f94f107b1da575bedfe805f8c23ff11e308fb6/openva_pipeline-0.0.0.9009-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "795f81bba974b1a046ad66f2d2193068", "sha256": "8ec09c1cacfa121d052bef9085589416abfacd7faf103442a6e1de82d673fc7b" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9009.tar.gz", "has_sig": false, "md5_digest": "795f81bba974b1a046ad66f2d2193068", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 310843, "upload_time": "2019-01-17T23:04:57", "url": "https://files.pythonhosted.org/packages/78/84/dc4be2dcc4da232d0e5bbad410b06c3010259a1fca5378a4ca371cc01a58/openva_pipeline-0.0.0.9009.tar.gz" } ], "0.0.0.9010": [ { "comment_text": "", "digests": { "md5": "dccb4c90835f27565876273d373b6c83", "sha256": "57723bd2b12ad273dcef1bf357e24b3f5dbeea3d17995b3682f7a4e7277ca497" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9010-py3-none-any.whl", "has_sig": false, "md5_digest": "dccb4c90835f27565876273d373b6c83", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": null, "size": 327097, "upload_time": "2019-01-21T05:28:39", "url": "https://files.pythonhosted.org/packages/36/10/64c8f16fa6d5950dceb3dd9c8ad1870760aa09812e51e59149b0df314565/openva_pipeline-0.0.0.9010-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "59e640ba8bc5bdc9f86eeb801aecdb59", "sha256": "a7e4bcc00f72bd6e3aee2bf349de5a54ef9e1ea9c2c186c2d1d823bd9339e121" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9010.tar.gz", "has_sig": false, "md5_digest": "59e640ba8bc5bdc9f86eeb801aecdb59", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 310886, "upload_time": "2019-01-21T05:28:41", "url": "https://files.pythonhosted.org/packages/a3/e0/e8cc23642fa02d3996d16e96e07a485a703a99efe12744972ee038a0933b/openva_pipeline-0.0.0.9010.tar.gz" } ], "0.0.0.9011": [ { "comment_text": "", "digests": { "md5": "43f21ce9c854ea39e2e473ae232dca91", "sha256": "ed6b9043340dd45759e289b1a6e186d8391aae06943275f42d48d271855fef6c" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9011-py3-none-any.whl", "has_sig": false, "md5_digest": "43f21ce9c854ea39e2e473ae232dca91", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": null, "size": 327092, "upload_time": "2019-02-04T21:35:32", "url": "https://files.pythonhosted.org/packages/b1/7e/04eaf733f4ce323fc72103d99b33009a8ca3eef5d8ee373976c110409698/openva_pipeline-0.0.0.9011-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "0ac28a87628a3f1405668923916de908", "sha256": "f03c94e0066ac042d40153dc065ef1a010588733ddd3166c46b39a2529ffd0c1" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9011.tar.gz", "has_sig": false, "md5_digest": "0ac28a87628a3f1405668923916de908", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 312459, "upload_time": "2019-02-04T21:35:34", "url": "https://files.pythonhosted.org/packages/16/94/5fa397de2e99ca60c4a395aed70bcfaa1b3a1e7de05e9ab8d2b0e9e6d299/openva_pipeline-0.0.0.9011.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "43f21ce9c854ea39e2e473ae232dca91", "sha256": "ed6b9043340dd45759e289b1a6e186d8391aae06943275f42d48d271855fef6c" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9011-py3-none-any.whl", "has_sig": false, "md5_digest": "43f21ce9c854ea39e2e473ae232dca91", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": null, "size": 327092, "upload_time": "2019-02-04T21:35:32", "url": "https://files.pythonhosted.org/packages/b1/7e/04eaf733f4ce323fc72103d99b33009a8ca3eef5d8ee373976c110409698/openva_pipeline-0.0.0.9011-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "0ac28a87628a3f1405668923916de908", "sha256": "f03c94e0066ac042d40153dc065ef1a010588733ddd3166c46b39a2529ffd0c1" }, "downloads": -1, "filename": "openva_pipeline-0.0.0.9011.tar.gz", "has_sig": false, "md5_digest": "0ac28a87628a3f1405668923916de908", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 312459, "upload_time": "2019-02-04T21:35:34", "url": "https://files.pythonhosted.org/packages/16/94/5fa397de2e99ca60c4a395aed70bcfaa1b3a1e7de05e9ab8d2b0e9e6d299/openva_pipeline-0.0.0.9011.tar.gz" } ] }