{ "info": { "author": "Ryan Raaum", "author_email": "code@raaum.org", "bugtrack_url": null, "classifiers": [ "Development Status :: 5 - Production/Stable", "Intended Audience :: Science/Research", "License :: OSI Approved :: MIT License", "Operating System :: OS Independent", "Programming Language :: Python", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "oldowan.polymorphism is a small bioinformatic utility for the management\nof molecular polymorphism data.\n\nInstallation Instructions\n=========================\n\nThis package is pure Python and has no dependencies outside of the standard\nlibrary. The easist way to install is using ``easy_install`` from the\nsetuptools_ package. This usually goes something like this::\n\n\t$ easy_install oldowan.polymorphism\n\nor on a unix-like system, assuming you are installing to the main Python\n``site-packages`` directory as a non-privileged user, this::\n\n\t$ sudo easy_install oldowan.polymorphism\n\nYou may also use the standard python distutils setup method. Download the\ncurrent source archive from the file list towards the bottom of this page,\nunarchive it, and install. On Mac OS X and many other unix-like systems, having\ndownloaded the archive and changed to the directory containing this archive in\nyour shell, this might go something like::\n\n\t$ tar xvzf oldowan.polymorphism*\n\t$ cd oldowan.polymorphism*\n\t$ python setup.py install\n\nQuick Start\n===========\n\nThis package provides a single utility class, ``Polymorphism``. Import\nthis class from oldowan.polymorphism::\n\n >>> from oldowan.polymorphism import Polymorphism\n\nCreate a new Polymorphism object::\n\n >>> p1 = Polymorphism(16223,0,'A','T')\n\nThe Polymorphism constructor requires 3 arguments and accepts and optional\nfourth argument. These are (in order):\n\n 1. ``position``, integer. \n 2. ``insert``, 0 if polymorphism is exactly at that position, or 1,2,3,... if\n insertion after. \n 3. ``value``, character value of polymorphism \n 4. ``reference``, optional value of a reference sequence at that position\n\n\nRelease History\n===============\n\n1.0.0 (March 25, 2009)\n initial release of module.\n\n1.0.1 (March 25, 2009)\n minor update for correct version numbering\n\n1.0.3 (August 4, 2015)\n actually fixed the version numbering this time\n\n.. _setuptools: http://peak.telecommunity.com/DevCenter/EasyInstall", "description_content_type": null, "docs_url": null, "download_url": "UNKNOWN", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "http://www.raaum.org/software/oldowan", "keywords": "", "license": "MIT", "maintainer": null, "maintainer_email": null, "name": "oldowan.polymorphism", "package_url": "https://pypi.org/project/oldowan.polymorphism/", "platform": "Any", "project_url": "https://pypi.org/project/oldowan.polymorphism/", "project_urls": { "Download": "UNKNOWN", "Homepage": "http://www.raaum.org/software/oldowan" }, "release_url": "https://pypi.org/project/oldowan.polymorphism/1.0.3/", "requires_dist": null, "requires_python": null, "summary": "Utilities for the management of molecular polymorphism data.", "version": "1.0.3" }, "last_serial": 1664122, "releases": { "1.0.0": [ { "comment_text": "", "digests": { "md5": "227855069071e06667379f5ee4ee8cab", "sha256": "5604618ae3cc6d37ad21e5c0501df6a8adbbd8b47a4358973a5104e2b774292c" }, "downloads": -1, "filename": "oldowan.polymorphism-1.0.0.tar.gz", "has_sig": false, "md5_digest": "227855069071e06667379f5ee4ee8cab", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 3130, "upload_time": "2009-03-25T17:11:06", "url": "https://files.pythonhosted.org/packages/5c/a5/04011f0ce9cb4689ffab689f44aaffb34771f65d1d91b4ac6097a368ebef/oldowan.polymorphism-1.0.0.tar.gz" } ], "1.0.1": [ { "comment_text": "", "digests": { "md5": "9ad75359f9ecfcff64e0d96da9fe66b3", "sha256": "01f380838b7bf9dc024e811c6f313b658dbef2805fa53d011954dbeebc64dfc0" }, "downloads": -1, "filename": "oldowan.polymorphism-1.0.1.tar.gz", "has_sig": false, "md5_digest": "9ad75359f9ecfcff64e0d96da9fe66b3", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 3293, "upload_time": "2009-03-26T14:24:46", "url": "https://files.pythonhosted.org/packages/47/e1/e9f8a748f626b2dd8f81c2fba600621ea4a2fa1c53af57853419aea73161/oldowan.polymorphism-1.0.1.tar.gz" } ], "1.0.2a": [ { "comment_text": "", "digests": { "md5": "5d882db4d5644fbb3d9f4df1e5c40d71", "sha256": "6cfb7615cbae19eca9ed793f7ebf7131dfd312d5cbf26a576d23c55cc4827a8b" }, "downloads": -1, "filename": "oldowan.polymorphism-1.0.2a.tar.gz", "has_sig": false, "md5_digest": "5d882db4d5644fbb3d9f4df1e5c40d71", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 3308, "upload_time": "2015-08-04T17:56:11", "url": "https://files.pythonhosted.org/packages/d2/21/89157d0c80d3053448e43bb84c4b81430926a16bce6049474ee44cfea5bd/oldowan.polymorphism-1.0.2a.tar.gz" } ], "1.0.3": [ { "comment_text": "", "digests": { "md5": "9069f001cef97ae06da38805804ebdb1", "sha256": "9b029e250114283250dfd079a194a4bf728f0feb9616712311a8ada29964c4e4" }, "downloads": -1, "filename": "oldowan.polymorphism-1.0.3.tar.gz", "has_sig": false, "md5_digest": "9069f001cef97ae06da38805804ebdb1", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 3306, "upload_time": "2015-08-04T18:16:15", "url": "https://files.pythonhosted.org/packages/bc/dc/8182df72c935ce8b99eb0d2205f56369a3a277657b5834cbd247819d27a4/oldowan.polymorphism-1.0.3.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "9069f001cef97ae06da38805804ebdb1", "sha256": "9b029e250114283250dfd079a194a4bf728f0feb9616712311a8ada29964c4e4" }, "downloads": -1, "filename": "oldowan.polymorphism-1.0.3.tar.gz", "has_sig": false, "md5_digest": "9069f001cef97ae06da38805804ebdb1", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 3306, "upload_time": "2015-08-04T18:16:15", "url": "https://files.pythonhosted.org/packages/bc/dc/8182df72c935ce8b99eb0d2205f56369a3a277657b5834cbd247819d27a4/oldowan.polymorphism-1.0.3.tar.gz" } ] }