{ "info": { "author": "clintval", "author_email": "valentine.clint@gmail.com", "bugtrack_url": null, "classifiers": [ "Development Status :: 2 - Pre-Alpha", "Intended Audience :: Developers", "Intended Audience :: Science/Research", "License :: OSI Approved :: MIT License", "Programming Language :: Python :: 3.6", "Programming Language :: Python :: 3.7", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "# nucleic\n\n[![Testing Status](https://travis-ci.org/clintval/nucleic.svg?branch=master)](https://travis-ci.org/clintval/nucleic)\n[![codecov](https://codecov.io/gh/clintval/nucleic/branch/master/graph/badge.svg)](https://codecov.io/gh/clintval/nucleic)\n[![Documentation Build Status](https://readthedocs.org/projects/nucleic/badge/?version=latest)](https://nucleic.readthedocs.io/en/latest/?badge=latest)\n[![PyPi Release](https://badge.fury.io/py/nucleic.svg)](https://badge.fury.io/py/nucleic)\n[![Python Versions](https://img.shields.io/pypi/pyversions/nucleic.svg)](https://pypi.python.org/pypi/nucleic/)\n[![MyPy Checked](http://www.mypy-lang.org/static/mypy_badge.svg)](http://mypy-lang.org/)\n[![Code style: black](https://img.shields.io/badge/code%20style-black-000000.svg)](https://github.com/ambv/black)\n\nAnalysis and plotting library for base substitution spectra and signatures.\n\n```bash\n\u276f pip install nucleic\n```\n\nFeatures:\n\n- Model DNA and variant alleles within their local context using an elegant API\n- Combine single nucleotide variants into spectrums of mutagenesis\n- Fetch COSMIC signatures of mutation as well as other published signatures\n- SVG plotting functions for displaying single nucleotide variant spectrums\n\nRead the documentation at: [nucleic.readthedocs.io](http://nucleic.readthedocs.io/)\n\n```python\nfrom nucleic import fetch_cosmic_signatures\nfrom nucleic.figures import plot_stratton_spectrum\n\nsignatures = fetch_cosmic_signatures()\ncanvas, (ax1, ax2) = plot_stratton_spectrum(signatures['Signature 24'])\n```\n\n![signature-24](https://raw.githubusercontent.com/clintval/nucleic/master/docs/img/signature-24.svg?sanitize=true \"Signature 24\")", "description_content_type": "text/markdown", "docs_url": null, "download_url": "https://github.com/clintval/nucleic/archive/v0.6.3.tar.gz", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/clintval/nucleic", "keywords": "signature mutation transition transversion spectra bioinformatics", "license": "MIT", "maintainer": "", "maintainer_email": "", "name": "nucleic", "package_url": "https://pypi.org/project/nucleic/", "platform": "", "project_url": "https://pypi.org/project/nucleic/", "project_urls": { "Documentation": "https://nucleic.readthedocs.io", "Download": "https://github.com/clintval/nucleic/archive/v0.6.3.tar.gz", "Homepage": "https://github.com/clintval/nucleic", "Issue-Tracker": "https://github.com/clintval/nucleic/issues" 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