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        "author": "Christian O'Reilly, Pierre-Alexandre Fonta",
        "author_email": "christian.oreilly@epfl.ch, pierre-alexandre.fonta@epfl.ch",
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        "classifiers": [
            "Development Status :: 3 - Alpha",
            "Environment :: X11 Applications :: Qt",
            "Intended Audience :: Science/Research",
            "License :: Free for non-commercial use",
            "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
            "Natural Language :: English",
            "Operating System :: MacOS",
            "Operating System :: Microsoft :: Windows",
            "Operating System :: POSIX :: Linux",
            "Programming Language :: Python :: 3.4",
            "Programming Language :: Python :: 3.5",
            "Programming Language :: Python :: 3.6",
            "Programming Language :: Python :: 3.7",
            "Programming Language :: Python :: 3 :: Only",
            "Topic :: Scientific/Engineering"
        ],
        "description": "`Getting Started <#getting-started>`__ \\| `Upgrade <#upgrade>`__ \\|\n`Releases <#releases>`__ \\| `Roadmap <#roadmap>`__ \\|\n`Status <#status>`__\n\n**For the Annotation Viewer or the integration with\nthe**\\ `OpenMinTeD <https://openminted.eu>`__\\ **platform, please refer\nto\nthis**\\ `branch <https://github.com/BlueBrain/neurocurator/blob/annotation_viewer/ANNOTATION_VIEWER.md>`__\\ **.**\n\nNeuroCurator\n============\n\nDesktop application to perform systematic and collaborative curation of\nneuroscientific literature.\n\nThis is a Graphical User Interface (GUI) for the Python module\n`NeuroAnnotation Toolbox (NAT) <https://github.com/BlueBrain/nat>`__.\n\nThis framework has been described in details in the following\nopen-access paper: https://doi.org/10.3389/fninf.2017.00027.\n\nWith NeuroCurator, annotations are: - traceable, - reusable across\nprojects, - structured with controlled vocabularies.\n\n--------------\n\nGetting Started\n---------------\n\nInstallation\n~~~~~~~~~~~~\n\nAfter having **installed Git and ImageMagick 6**:\n\n.. code:: bash\n\n   pip3 install neurocurator\n\nIf you would like to simplify the installation with Miniconda:\n\n.. code:: bash\n\n   conda create --name nc python=3.7\n   conda activate nc\n   conda install beautifulsoup4 gitpython lxml numpy pandas scipy\n   pip install neurocurator\n\n**Requirements**\n\n-  System side:\n\n   -  `Python 3.4+ <https://www.python.org/downloads/>`__\n   -  `Qt 5.11+ <https://doc.qt.io/qt-5/gettingstarted.html>`__\n   -  `Git 1.7.0+ <https://git-scm.com/downloads>`__\n   -  `ImageMagick\n      6 <http://docs.wand-py.org/en/latest/guide/install.html>`__\n   -  `Miniconda <https://conda.io/miniconda.html>`__ (optional)\n\n-  Python side:\n\n   -  `NAT <https://pypi.org/project/nat/>`__\n   -  `PyQt5 <https://pypi.org/project/PyQt5/>`__\n   -  `NumPy <https://pypi.org/project/numpy/>`__\n   -  `pandas <https://pypi.org/project/pandas/>`__\n   -  `Wand <https://pypi.org/project/Wand/>`__\n\nLaunch\n~~~~~~\n\n.. code:: bash\n\n   neurocurator\n\nIf you have used Miniconda:\n\n.. code:: bash\n\n   conda activate nc\n   neurocurator\n\nUpgrade\n-------\n\n.. code:: bash\n\n   pip install --upgrade neurocurator\n\nIf you have used Miniconda:\n\n.. code:: bash\n\n   conda activate nc\n   pip install --upgrade neurocurator\n\nReleases\n--------\n\nVersions and their notable changes are listed in the `releases\nsection <https://github.com/BlueBrain/neurocurator/releases/>`__.\n\nRoadmap\n-------\n\n**Ongoing**\n\n1. Make the annotations publishable into a `Blue Brain\n   Nexus <https://bluebrain.github.io/nexus/>`__ instance.\n2. Stabilize NeuroCurator and NAT (Software Architecture).\n\n**TODO**\n\n1. Integrate fully the `Annotation\n   Viewer <https://github.com/BlueBrain/neurocurator/blob/annotation_viewer/ANNOTATION_VIEWER.md>`__\n   into NeuroCurator.\n2. Semi-automate the Knowledge Extraction process.\n\n**Done** (latest first)\n\n-  Remove legacy dependencies in NeuroCurator (Qt 4 and Python 3.4).\n-  Integrate OpenMinTeD annotations into the literature curation\n   framework.\n-  Visualize NeuroCurator and OpenMinTeD annotations directly on PDFs.\n-  Make NeuroCurator easily installable, especially by scientists.\n\nUpdated on 20.07.18.\n\nStatus\n------\n\nCreated during 2016.\n\nOngoing stabilization and reengineering in the branch\n*refactor-architecture*.\n\nThe branch *refactor-architecture* is **not** intended to be used by\nend-users.\n\nNew features, bug fixes and improvements are done on the reengineered\ncode sections.\n\nWhen a reengineered code section is stable, it\u2019s merged into the branch\n*master* and a release is published.\n\n\n",
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