{ "info": { "author": "Paul Joseph Davis", "author_email": "davisp@neb.com", "bugtrack_url": null, "classifiers": [ "Development Status :: 3 - Alpha", "Intended Audience :: Developers", "Intended Audience :: Science/Research", "License :: OSI Approved :: MIT License", "Natural Language :: English", "Operating System :: OS Independent", "Programming Language :: Python", "Topic :: Scientific/Engineering :: Bio-Informatics", "Topic :: Software Development :: Libraries :: Python Modules" ], "description": "nebfa - Fasta File Parser\n=========================\n\nUsage:\n\n >>> import nebfa\n >>> rec = nebfa.parse(open(\"./test/data/basic.fa\")).next()\n >>> rec.id\n ('gi', '0120123123')\n >>> rec.desc\n 'Some stuff'\n >>> rec.sequence\n 'ACGT'\n >>> rec.hash\n '2108994E17F6CCA9FF2352ADA92B6511DB076034'\n \n # Alternatively, parse_file avoids the need for a call to open.\n >>> for rec in nebfa.parse_file(\"./test/data/multi.fa\"):\n ... print rec.id\n ('gi', '0120123123')\n ('ref', 'YP_234234.2')\n\nRecords also have a meta attribute that has two keys for identifiers and\ndescriptions. You will need to consult that member when you have Ctl-A separated\ndeflines. If you have a better syntax suggestion please send a note along.", "description_content_type": null, "docs_url": null, "download_url": "UNKNOWN", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "http://github.com/davisp/nebgb", "keywords": "bioinformatics fasta parser", "license": "MIT", "maintainer": null, "maintainer_email": null, "name": "nebfa", "package_url": "https://pypi.org/project/nebfa/", "platform": "any", "project_url": "https://pypi.org/project/nebfa/", "project_urls": { "Download": "UNKNOWN", "Homepage": "http://github.com/davisp/nebgb" }, "release_url": "https://pypi.org/project/nebfa/0.0.2/", "requires_dist": null, "requires_python": null, "summary": "Fasta file parser.", "version": "0.0.2" }, "last_serial": 795216, "releases": { "0.0.1": [ { "comment_text": "", "digests": { "md5": "428b3a169bad6dfb686ad3c942576df1", "sha256": "fb7a4b7b2995317378c30883fec406b8e6f6f3cc38b1cdd6a3b54ef59a95fef1" }, "downloads": -1, "filename": "nebfa-0.0.1.tar.gz", "has_sig": false, "md5_digest": "428b3a169bad6dfb686ad3c942576df1", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 4361, "upload_time": "2009-07-24T23:41:25", "url": "https://files.pythonhosted.org/packages/6b/c8/83640d4f9ef665290ea347dc48ca6714b552b510f87eaf9c6a2815975faf/nebfa-0.0.1.tar.gz" } ], "0.0.2": [ { "comment_text": "", "digests": { "md5": "cd0b6f5ada169b74c1dd073956419d81", "sha256": "3738b8174d895ca1f4dbde7e1e765bd6b743a0d2b8ea91c9bbca393333bb101a" }, "downloads": -1, "filename": "nebfa-0.0.2.tar.gz", "has_sig": false, "md5_digest": "cd0b6f5ada169b74c1dd073956419d81", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 9356, "upload_time": "2009-08-01T22:23:30", "url": "https://files.pythonhosted.org/packages/17/e3/802f5c46c8ef8eb63ebb214760c20906afd629e571f8f6d5fd74d4442924/nebfa-0.0.2.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "cd0b6f5ada169b74c1dd073956419d81", "sha256": "3738b8174d895ca1f4dbde7e1e765bd6b743a0d2b8ea91c9bbca393333bb101a" }, "downloads": -1, "filename": "nebfa-0.0.2.tar.gz", "has_sig": false, "md5_digest": "cd0b6f5ada169b74c1dd073956419d81", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 9356, "upload_time": "2009-08-01T22:23:30", "url": "https://files.pythonhosted.org/packages/17/e3/802f5c46c8ef8eb63ebb214760c20906afd629e571f8f6d5fd74d4442924/nebfa-0.0.2.tar.gz" } ] }