{
    "info": {
        "author": "Wouter De Coster",
        "author_email": "decosterwouter@gmail.com",
        "bugtrack_url": null,
        "classifiers": [
            "Development Status :: 4 - Beta",
            "Intended Audience :: Science/Research",
            "License :: OSI Approved :: MIT License",
            "Programming Language :: Python :: 3",
            "Programming Language :: Python :: 3.3",
            "Programming Language :: Python :: 3.4",
            "Programming Language :: Python :: 3.5",
            "Topic :: Scientific/Engineering :: Bio-Informatics"
        ],
        "description": "NANOPACK\n========\n\nEasily install all my long read processing and analysis scripts\nsimultaneously.\n\nInstallation\n------------\n\n``pip install nanopack`` ## Updating ``pip install nanopack --upgrade``\n\nContent\n-------\n\nScripts\n~~~~~~~\n\n**`NanoPlot <https://github.com/wdecoster/NanoPlot>`__**: creating many\nrelevant plots derived from reads (fastq), alignments (bam) and albacore\nsummary files. Examples can be found in `the gallery on my\nblog <https://gigabaseorgigabyte.wordpress.com/2017/06/01/example-gallery-of-nanoplot/>`__.\nNanoPack is also available with a graphical user interface in\n**`NanoGUI <https://github.com/wdecoster/nanogui>`__**.\n\n**`NanoComp <https://github.com/wdecoster/nanocomp>`__**: comparing\nmultiple runs on read length and quality based on reads (fastq),\nalignments (bam) or albacore summary files.\n\n**`NanoStat <https://github.com/wdecoster/nanostat>`__**: Quickly create\na statistical summary from reads, an alignment or a summary file.\n\n**`NanoFilt <https://github.com/wdecoster/nanofilt>`__**: Streaming\nscript for filtering a fastq file based on a minimum length and minimum\nquality cut-off. Also trimming nucleotides from either read ends is an\noption.\n\n**`NanoLyse <https://github.com/wdecoster/nanolyse>`__**: Streaming\nscript for filtering a fastq file to remove reads mapping to the lambda\nphage genome (control DNA used in nanopore sequencing). Uses\n`minimap2/mappy <https://github.com/lh3/minimap2>`__.\n\nModules\n~~~~~~~\n\n**`nanoget <https://github.com/wdecoster/nanoget>`__**: Functions for\nextracting features from reads, alignments and albacore summary data,\nparallelized.\n\n**`nanomath <https://github.com/wdecoster/nanomath>`__**: Functions for\nmathematical processing and calculating statistics.\n\n**`nanoplotter <https://github.com/wdecoster/nanoplotter>`__**:\nAppropriate plotting functions, building on the\n`seaborn <https://seaborn.pydata.org/>`__ module.\n\nTest data\n~~~~~~~~~\n\n**`nanotest <https://github.com/wdecoster/nanotest>`__** provides small\ntest datasets in fastq, bam and summary format (not included when\ninstalling NanoPack)",
        "description_content_type": null,
        "docs_url": null,
        "download_url": "",
        "downloads": {
            "last_day": -1,
            "last_month": -1,
            "last_week": -1
        },
        "home_page": "https://github.com/wdecoster/nanopack",
        "keywords": "nanopore sequencing processing analysis",
        "license": "MIT",
        "maintainer": "",
        "maintainer_email": "",
        "name": "nanopack",
        "package_url": "https://pypi.org/project/nanopack/",
        "platform": "",
        "project_url": "https://pypi.org/project/nanopack/",
        "project_urls": {
            "Homepage": "https://github.com/wdecoster/nanopack"
        },
        "release_url": "https://pypi.org/project/nanopack/1.0.0/",
        "requires_dist": null,
        "requires_python": ">=3",
        "summary": "Install all Oxford Nanopore scrips and modules for processing and analysis",
        "version": "1.0.0"
    },
    "last_serial": 3511349,
    "releases": {
        "0.1.0": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "f7b9872688bc14391f172aa51c1183b4",
                    "sha256": "b482dbc2f9eb98788d860ff74d22de1c45842b6e1c7f17f4c35a788dee68aa11"
                },
                "downloads": -1,
                "filename": "nanopack-0.1.0.tar.gz",
                "has_sig": false,
                "md5_digest": "f7b9872688bc14391f172aa51c1183b4",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 2037,
                "upload_time": "2017-10-02T12:29:04",
                "url": "https://files.pythonhosted.org/packages/82/54/d16c40682721e3022792fad2503f2df0413ae1dba42632f8da54fa63a72e/nanopack-0.1.0.tar.gz"
            }
        ],
        "0.1.1": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "b3ed025ceb080164492d7673d3f987a0",
                    "sha256": "bc8eebc9e27634326c40ec7895cce1d61eab2303570ba16ace9962369ff4036e"
                },
                "downloads": -1,
                "filename": "nanopack-0.1.1.tar.gz",
                "has_sig": false,
                "md5_digest": "b3ed025ceb080164492d7673d3f987a0",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 2036,
                "upload_time": "2017-10-02T12:31:29",
                "url": "https://files.pythonhosted.org/packages/60/6a/1c564b91b7e0370709b51be493f6e0f309df34fd3d10b89b265332ea3dfc/nanopack-0.1.1.tar.gz"
            }
        ],
        "0.1.2": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "390bf5b5f206bc026eee7acbc8820a3a",
                    "sha256": "e704215e407b421f62ebff5d0c615c11e6400e8a98dd28ef1f168de7c1b53d00"
                },
                "downloads": -1,
                "filename": "nanopack-0.1.2.tar.gz",
                "has_sig": false,
                "md5_digest": "390bf5b5f206bc026eee7acbc8820a3a",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 2039,
                "upload_time": "2017-10-02T12:34:41",
                "url": "https://files.pythonhosted.org/packages/8c/b4/7ea6237e9d09a3082ffc0d4a09961ef26895bf9d353588345871b6eca2f1/nanopack-0.1.2.tar.gz"
            }
        ],
        "0.1.3": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "db16b556fb415800554a72fb0e60e28d",
                    "sha256": "0ac4903448c4fdbf1dcd4409975709110a62511ee974f3971c2d9fef5ec4b18c"
                },
                "downloads": -1,
                "filename": "nanopack-0.1.3.tar.gz",
                "has_sig": false,
                "md5_digest": "db16b556fb415800554a72fb0e60e28d",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 2167,
                "upload_time": "2017-10-02T12:36:08",
                "url": "https://files.pythonhosted.org/packages/35/b2/0178fa5bb4ae36584583ec49e67546adf50c19a77107534d1d67ff28b249/nanopack-0.1.3.tar.gz"
            }
        ],
        "0.1.4": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "fe69beb416fa2697ad1247ec6bcbc6be",
                    "sha256": "7a43f7377bf4a0b5ce94c7899bd4adc3938d32b136138bb5ffe31eff9e7ef63a"
                },
                "downloads": -1,
                "filename": "nanopack-0.1.4.tar.gz",
                "has_sig": false,
                "md5_digest": "fe69beb416fa2697ad1247ec6bcbc6be",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 2211,
                "upload_time": "2017-10-20T12:25:55",
                "url": "https://files.pythonhosted.org/packages/3b/cc/52bdfaa3fb739d6fc26ac9ec55cd63d7db06d73bf0d7d096b37b7b2839bf/nanopack-0.1.4.tar.gz"
            }
        ],
        "1.0.0": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "c1a2514850eb286f2e0deb1dfadc81a3",
                    "sha256": "01483ae95413c5b2464cdf0e9185f644812b2d704a1c47c20acdd7dbcf9dd1d4"
                },
                "downloads": -1,
                "filename": "nanopack-1.0.0.tar.gz",
                "has_sig": false,
                "md5_digest": "c1a2514850eb286f2e0deb1dfadc81a3",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": ">=3",
                "size": 2538,
                "upload_time": "2018-01-22T14:39:32",
                "url": "https://files.pythonhosted.org/packages/54/24/f5b5a96a6a32d1127eb547745ab9572286035058f60a2988bdd2b1673bd7/nanopack-1.0.0.tar.gz"
            }
        ]
    },
    "urls": [
        {
            "comment_text": "",
            "digests": {
                "md5": "c1a2514850eb286f2e0deb1dfadc81a3",
                "sha256": "01483ae95413c5b2464cdf0e9185f644812b2d704a1c47c20acdd7dbcf9dd1d4"
            },
            "downloads": -1,
            "filename": "nanopack-1.0.0.tar.gz",
            "has_sig": false,
            "md5_digest": "c1a2514850eb286f2e0deb1dfadc81a3",
            "packagetype": "sdist",
            "python_version": "source",
            "requires_python": ">=3",
            "size": 2538,
            "upload_time": "2018-01-22T14:39:32",
            "url": "https://files.pythonhosted.org/packages/54/24/f5b5a96a6a32d1127eb547745ab9572286035058f60a2988bdd2b1673bd7/nanopack-1.0.0.tar.gz"
        }
    ]
}