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            "Programming Language :: Python :: 3",
            "Programming Language :: Python :: 3.3",
            "Programming Language :: Python :: 3.4",
            "Programming Language :: Python :: 3.5",
            "Topic :: Scientific/Engineering :: Bio-Informatics"
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        "description": "# nanoQC\nQuality control tools for long read sequencing data aiming to replicate some of the plots made by fastQC. This is an immature tool and I welcome all contributions.\n\n[![Twitter URL](https://img.shields.io/twitter/url/https/twitter.com/wouter_decoster.svg?style=social&label=Follow%20%40wouter_decoster)](https://twitter.com/wouter_decoster)\n[![install with conda](https://anaconda.org/bioconda/nanoqc/badges/installer/conda.svg)](https://anaconda.org/bioconda/nanoqc)\n\n\nCreates dynamic plots using [bokeh](https://bokeh.pydata.org/en/latest/).\nFor an example see [here](http://decoster.xyz/wouter/)\n\n\n## INSTALLATION\n```bash\npip install nanoQC\n```\nor  \n[![install with conda](https://anaconda.org/bioconda/nanoqc/badges/installer/conda.svg)](https://anaconda.org/bioconda/nanoqc)\n```\nconda install -c bioconda nanoqc\n```\n\n\n## USAGE\n```\nnanoQC [-h] [-v] [-o OUTDIR] fastq\n\npositional arguments:\n  fastq                 Reads data in fastq.gz format.\n\noptional arguments:\n  -h, --help            show this help message and exit\n  -v, --version         Print version and exit.\n  -o, --outdir OUTDIR   Specify directory in which output has to be created.\n  -l, --minlen int      Minimum length of reads to be included in the plots\n                        This also controls the length plotted in the graphs\n                        from the beginning and end of reads (length plotted = minlen / 2)\n```\n\n## CITATION\nIf you use this tool, please consider citing our [publication](https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/bty149/4934939).\n\n## CONTRIBUTIONS\nThanks to:\n -  Jasper Ouwerkerk ([JasperO98](https://github.com/JasperO98)) for improving how reads are selected (v0.8.0)",
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