{
    "info": {
        "author": "Arjun Chennu",
        "author_email": "arjun.chennu@gmail.com",
        "bugtrack_url": null,
        "classifiers": [
            "Development Status :: 2 - Pre-Alpha",
            "Intended Audience :: Developers",
            "License :: OSI Approved :: MIT License",
            "Natural Language :: English",
            "Programming Language :: Python :: 2.7"
        ],
        "description": ".. image:: https://img.shields.io/pypi/v/microbenthos.svg\n    :target: https://pypi.python.org/pypi/microbenthos\n\n.. image:: https://travis-ci.org/achennu/microbenthos.svg?branch=master\n    :target: https://travis-ci.org/achennu/microbenthos\n\n.. image:: https://readthedocs.org/projects/microbenthos/badge/?version=latest\n    :target: https://microbenthos.readthedocs.io/en/latest/?badge=latest\n    :alt: Documentation Status\n\n.. image:: http://joss.theoj.org/papers/5daae2e14258034d77cb694370cbae23/status.svg\n    :target: http://joss.theoj.org/papers/5daae2e14258034d77cb694370cbae23\n    :alt: Journal of Open Source Software\n\nMicroBenthos is a modeling framework (in python) useful for studies of benthic microbial systems,\nsuch as microbial mats, marine sediments, etc. It enables in silico experiments in microbial\necophysiology and biogeochemistry through computational simulations of geochemical processes,\nmicrobial metabolism and mass transport physics.\n\n* Free software: MIT license\n* Documentation: https://microbenthos.readthedocs.io\n* Source code: https://github.com/achennu/microbenthos\n\nSimulation example\n-------------------\n\nFrom `youtube <https://www.youtube.com/watch?v=CnHjVJKXo0A>`_\n\n.. raw:: html\n\n    <div style=\"position: relative; padding-bottom: 56.25%; height: 0; overflow: hidden;\n    max-width: 90%; height: auto;\">\n        <iframe src=\"https://www.youtube.com/embed/CnHjVJKXo0A\" frameborder=\"0\" allowfullscreen\n        style=\"position: absolute; top: 0; left: 0; width: 100%; height: 100%;\"></iframe>\n    </div>\n\nFeatures\n--------\n\n* Create microbenthic systems:\n    Study dynamics of microbial and geochemical sedimentary processes by solving their partial\n    differential equations. Easily include microbial populations, solar irradiance, anisotropic\n    diffusion and more in your models.\n\n* Scientist-friendly:\n    Define constitutive chemical and biological processes simply as mathematical formulae. Data\n    is saved in open archival format.\n\n* Visualize on the go:\n    Includes visualization of modelled parameters and results that can be viewed live, and\n    exported to video. Progress information on simulation is also shown.\n\n* Stateful simulations:\n    Simulations can be interrupted and then resumed, allowing for interactive inspection and\n    time-saving.\n\n* No programming required:\n    Systems and behavior can be defined through a structured text file.\n\n* Extensible:\n    New modalities of microbial systems can be created with simple programming around a defined\n    structure.\n\n\n\n\n\n",
        "description_content_type": "",
        "docs_url": null,
        "download_url": "",
        "downloads": {
            "last_day": -1,
            "last_month": -1,
            "last_week": -1
        },
        "home_page": "https://microbenthos.readthedocs.io",
        "keywords": "microbenthos,biogeochemistry,marine biology,microbial ecology,simulation,modeling,microbial mats,sediments",
        "license": "MIT license",
        "maintainer": "",
        "maintainer_email": "",
        "name": "microbenthos",
        "package_url": "https://pypi.org/project/microbenthos/",
        "platform": "",
        "project_url": "https://pypi.org/project/microbenthos/",
        "project_urls": {
            "Homepage": "https://microbenthos.readthedocs.io"
        },
        "release_url": "https://pypi.org/project/microbenthos/0.9.2/",
        "requires_dist": [
            "click (>=6.0)",
            "logutils",
            "sympy",
            "cerberus",
            "PyYaml",
            "h5py",
            "tqdm",
            "matplotlib (>=2.1)",
            "scipy (>=1.0.0)",
            "numpy",
            "fipy",
            "sphinx; extra == 'docs'",
            "sphinx-rtd-theme; extra == 'docs'",
            "sphinxcontrib-programoutput; extra == 'docs'",
            "sphinx-autodoc-typehints; extra == 'docs'",
            "pytest; extra == 'test'",
            "mock; extra == 'test'"
        ],
        "requires_python": "",
        "summary": "Modeling framework for microbenthic habitats useful for studies in biogeochemistry and marine microbial ecology.",
        "version": "0.9.2"
    },
    "last_serial": 4034585,
    "releases": {
        "0.8.1": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "715f136dc14461c4d775938e091746ac",
                    "sha256": "dad381b5735d7e0bdd1849cd559bfe2b16396e3822f37cc75edafa1ff04759d2"
                },
                "downloads": -1,
                "filename": "microbenthos-0.8.1-py2.7.egg",
                "has_sig": false,
                "md5_digest": "715f136dc14461c4d775938e091746ac",
                "packagetype": "bdist_egg",
                "python_version": "2.7",
                "requires_python": null,
                "size": 194604,
                "upload_time": "2018-04-04T11:52:47",
                "url": "https://files.pythonhosted.org/packages/fc/66/0f97a7d41507d14ad69fff03cdee3ab198cae4ab45a357c4f4924f97756e/microbenthos-0.8.1-py2.7.egg"
            },
            {
                "comment_text": "",
                "digests": {
                    "md5": "39a3d8adb7cbb594f049143614ecfaa8",
                    "sha256": "1f30e8dba9abfee1d74b72840feece3f7d410e56a61ccff08009c532d2dc43b3"
                },
                "downloads": -1,
                "filename": "microbenthos-0.8.1-py2.py3-none-any.whl",
                "has_sig": false,
                "md5_digest": "39a3d8adb7cbb594f049143614ecfaa8",
                "packagetype": "bdist_wheel",
                "python_version": "py2.py3",
                "requires_python": null,
                "size": 87029,
                "upload_time": "2018-04-04T11:52:44",
                "url": "https://files.pythonhosted.org/packages/98/7d/0ac52dee6ef68be0cbdd87ecca6770aea9a58401cdae3a085f895faa28a6/microbenthos-0.8.1-py2.py3-none-any.whl"
            },
            {
                "comment_text": "",
                "digests": {
                    "md5": "4acb4bf6ce07491964fc2ebe84e9a76c",
                    "sha256": "8fcfe68faf3cd708b24a9d31c2abd1328807e0de2fee6fd7ca0fef6343deab0f"
                },
                "downloads": -1,
                "filename": "microbenthos-0.8.1.tar.gz",
                "has_sig": false,
                "md5_digest": "4acb4bf6ce07491964fc2ebe84e9a76c",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 488031,
                "upload_time": "2018-04-04T11:48:25",
                "url": "https://files.pythonhosted.org/packages/9b/cd/2b54072ed2399ac276581c97073c07ef7c7d7f4a400381076886375699fb/microbenthos-0.8.1.tar.gz"
            }
        ],
        "0.8.2": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "67947e2b29670231aee172094dfdf39d",
                    "sha256": "6fb89a4e9d439540a63e6f964d43bde681f77bd7125fcdd2cf739fbe5c0813cc"
                },
                "downloads": -1,
                "filename": "microbenthos-0.8.2-py2.py3-none-any.whl",
                "has_sig": false,
                "md5_digest": "67947e2b29670231aee172094dfdf39d",
                "packagetype": "bdist_wheel",
                "python_version": "py2.py3",
                "requires_python": null,
                "size": 84787,
                "upload_time": "2018-04-04T12:33:16",
                "url": "https://files.pythonhosted.org/packages/15/57/2dc337ffa368e0a971e17833acea9dacb0fe3545d14b1c32b65c76b3db1f/microbenthos-0.8.2-py2.py3-none-any.whl"
            },
            {
                "comment_text": "",
                "digests": {
                    "md5": "cf478127b3c96b11bd8cceda084445c4",
                    "sha256": "93473582d70652bf81bb8af752c32b4ca3068304934b32ee2538dfa027850250"
                },
                "downloads": -1,
                "filename": "microbenthos-0.8.2.tar.gz",
                "has_sig": false,
                "md5_digest": "cf478127b3c96b11bd8cceda084445c4",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 487983,
                "upload_time": "2018-04-04T12:33:22",
                "url": "https://files.pythonhosted.org/packages/38/17/b368cb0d4529188b4f1447e5dfc6881a0027269b0840ab63c69f4018ac8b/microbenthos-0.8.2.tar.gz"
            }
        ],
        "0.9": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "ed362d74509c40a2754f0dd93322aa4f",
                    "sha256": "88b44817ce199b0fbb2de601ca2e5b3be16a0150c7873e3b9d7529d4f8515229"
                },
                "downloads": -1,
                "filename": "microbenthos-0.9-py2.py3-none-any.whl",
                "has_sig": false,
                "md5_digest": "ed362d74509c40a2754f0dd93322aa4f",
                "packagetype": "bdist_wheel",
                "python_version": "py2.py3",
                "requires_python": null,
                "size": 85484,
                "upload_time": "2018-04-09T14:23:47",
                "url": "https://files.pythonhosted.org/packages/80/e6/aeb8d157fb121fe9d82f1039fdf39ac33109a65148ec236ef92062bba9bd/microbenthos-0.9-py2.py3-none-any.whl"
            },
            {
                "comment_text": "",
                "digests": {
                    "md5": "8133e831900bbe7a2338d5eb039f65ba",
                    "sha256": "b7e0655fa2a5d3fbdbfaf488cabc78afaeb2a561eb2df79cacd8dc551ad5360b"
                },
                "downloads": -1,
                "filename": "microbenthos-0.9.tar.gz",
                "has_sig": false,
                "md5_digest": "8133e831900bbe7a2338d5eb039f65ba",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 572718,
                "upload_time": "2018-04-09T14:23:49",
                "url": "https://files.pythonhosted.org/packages/c5/9a/f96dee5e21d132689c16dbef8d5378859f83544fc65cb410f897ddb624e7/microbenthos-0.9.tar.gz"
            }
        ],
        "0.9.2": [
            {
                "comment_text": "",
                "digests": {
                    "md5": "bf89f1edcdbadc42d96cd3616acdd09d",
                    "sha256": "12034c01ba0d37b6c30028959c31b0ac7b7cb40f18713c8dfad4916b3881082a"
                },
                "downloads": -1,
                "filename": "microbenthos-0.9.2-py2.py3-none-any.whl",
                "has_sig": false,
                "md5_digest": "bf89f1edcdbadc42d96cd3616acdd09d",
                "packagetype": "bdist_wheel",
                "python_version": "py2.py3",
                "requires_python": null,
                "size": 85647,
                "upload_time": "2018-07-05T21:35:07",
                "url": "https://files.pythonhosted.org/packages/5b/dc/ddc90c4639b293dabdbcbbd872a1b1db914a105d7a3be395a4ce29c8bedd/microbenthos-0.9.2-py2.py3-none-any.whl"
            },
            {
                "comment_text": "",
                "digests": {
                    "md5": "c04e523032b1e3947412769a3f6c778c",
                    "sha256": "18d2003c63e8c6d54194ac5990356aa83a8bf50d38e4fe4fba35eea7e8818b6c"
                },
                "downloads": -1,
                "filename": "microbenthos-0.9.2.tar.gz",
                "has_sig": false,
                "md5_digest": "c04e523032b1e3947412769a3f6c778c",
                "packagetype": "sdist",
                "python_version": "source",
                "requires_python": null,
                "size": 573262,
                "upload_time": "2018-07-05T21:35:14",
                "url": "https://files.pythonhosted.org/packages/98/80/5bc3c866466252f90cbf51cba401a3db0c39df6cccfd1c30b49db2d171ba/microbenthos-0.9.2.tar.gz"
            }
        ]
    },
    "urls": [
        {
            "comment_text": "",
            "digests": {
                "md5": "bf89f1edcdbadc42d96cd3616acdd09d",
                "sha256": "12034c01ba0d37b6c30028959c31b0ac7b7cb40f18713c8dfad4916b3881082a"
            },
            "downloads": -1,
            "filename": "microbenthos-0.9.2-py2.py3-none-any.whl",
            "has_sig": false,
            "md5_digest": "bf89f1edcdbadc42d96cd3616acdd09d",
            "packagetype": "bdist_wheel",
            "python_version": "py2.py3",
            "requires_python": null,
            "size": 85647,
            "upload_time": "2018-07-05T21:35:07",
            "url": "https://files.pythonhosted.org/packages/5b/dc/ddc90c4639b293dabdbcbbd872a1b1db914a105d7a3be395a4ce29c8bedd/microbenthos-0.9.2-py2.py3-none-any.whl"
        },
        {
            "comment_text": "",
            "digests": {
                "md5": "c04e523032b1e3947412769a3f6c778c",
                "sha256": "18d2003c63e8c6d54194ac5990356aa83a8bf50d38e4fe4fba35eea7e8818b6c"
            },
            "downloads": -1,
            "filename": "microbenthos-0.9.2.tar.gz",
            "has_sig": false,
            "md5_digest": "c04e523032b1e3947412769a3f6c778c",
            "packagetype": "sdist",
            "python_version": "source",
            "requires_python": null,
            "size": 573262,
            "upload_time": "2018-07-05T21:35:14",
            "url": "https://files.pythonhosted.org/packages/98/80/5bc3c866466252f90cbf51cba401a3db0c39df6cccfd1c30b49db2d171ba/microbenthos-0.9.2.tar.gz"
        }
    ]
}