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        "author": "Alexandrov Team, EMBL",
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            "Topic :: Scientific/Engineering :: Bio-Informatics"
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        "description": "# METASPACE Python client\n\nPython module that provides programmatic access to the [METASPACE](https://metaspace2020.eu) platform.\n\n## Applications\n\n* Running batch jobs\n* Exploratory analysis of submitted data\n* Quick access to things hidden from web interface (such as location of files on S3 and other metadata)\n\n## Installation\n\nYou need to have **Python 3.6 or higher** to use this library.\n\n`pip install metaspace2020`\n\n## Jupyter Notebooks\n\nThere are several playbooks available to retrieve dataset information as well as to upload it on Metaspace.\n\n| Notebook | Description |\n| :--- | :--- |\n| **access_change_PI_names**| Reads and updates PI names in dataset metadata |\n| **api_examples**| Illustrates how to access all the information about a dataset that is visible on the [METASPACE](metaspace2020.eu) platform |\n| **compare-reference-engine-results**| Compares engine results against the pySM reference implementation |\n| **iso_img_retrieval**| Retrieves isotopic images for the provided dataset |\n| **simple_database_queries**| A few queries to get annotations for a dataset, show stats on the annotations, and compare annotations between two datasets |\n| **top_hits**| Retrieves ions with the highest average MSM score across all datasets |\n| **update_DBs_dataset_api**| Reprocesses a dataset with a different set of databases |\n| **upload_dataset_api**| Uploads a new dataset with the provided metadata |\n\n\n## Funding\n\nThis project is funded from the [European Horizon2020](https://ec.europa.eu/programmes/horizon2020/)\nproject [METASPACE](http://project.metaspace2020.eu/) (no. 634402),\n[NIH NIDDK project KPMP](https://www.niddk.nih.gov/research-funding/research-programs/kidney-precision-medicine-project-kpmp)\nand internal funds of the [European Molecular Biology Laboratory](https://www.embl.org/).\n\n## License\n\nUnless specified otherwise in file headers, all files are licensed under the [Apache 2.0 license](LICENSE).\n\n\n",
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