{ "info": { "author": "Maurits Dijkstra", "author_email": "mauritsdijkstra@gmail.com", "bugtrack_url": null, "classifiers": [ "Development Status :: 5 - Production/Stable", "Environment :: Console", "Intended Audience :: Science/Research", "License :: OSI Approved :: GNU General Public License v2 (GPLv2)", "Programming Language :: Python :: 2.7", "Programming Language :: Python :: 3.6" ], "description": "# Motif-Aware PRALINE (MA-PRALINE)\n\nA motif-aware multiple sequence alignment tool. An article accompanying this software has been published in PLOS Computational Biology [here](https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1006547).\n\n# Installing MA-PRALINE\n\n## Requirements\n\n* Python 2.7 / Python 3.6 (earlier 3.x versions may also work, but have not been tested)\n* An installation of PRALINE (https://github.com/ibivu/PRALINE)\n\n## Instructions\n\nYou can install MA-PRALINE by cloning this repository and running (in a shell):\n\n`python setup.py install`\n\nMA-PRALINE is also available on PyPI. You can install it with the following command:\n\n`pip install ma-praline`\n\n# Extras\n\nThere is an additional repository at https://github.com/ibivu/MA-PRALINE-extras containing\nauxiliary code that was used to perform various analyses while developing MA-PRALINE.\nAlthough no support is provided for this code, some people may find it useful to, e.g.\nreparameterise MA-PRALINE or to calculate motif statistics.", "description_content_type": "text/markdown", "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/ibivu/MA-PRALINE/", "keywords": "", "license": "GPLv2", "maintainer": "", "maintainer_email": "", "name": "ma-praline", "package_url": "https://pypi.org/project/ma-praline/", "platform": "", "project_url": "https://pypi.org/project/ma-praline/", "project_urls": { "Homepage": "https://github.com/ibivu/MA-PRALINE/" }, "release_url": "https://pypi.org/project/ma-praline/1.1.0/", "requires_dist": null, "requires_python": ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.2.*,!=3.3.*,!=3.4.*", "summary": "PRALINE workflow for motif-aware alignment (MA-PRALINE).", "version": "1.1.0" }, "last_serial": 4503464, "releases": { "1.1.0": [ { "comment_text": "", "digests": { "md5": "bb1ba2705e3e8ebd9b599616561b6a24", "sha256": "dbe24ca22cf8b02fa7d33c0873f52f1121392ab7c890425a7c755b4fbc9bc459" }, "downloads": -1, "filename": "ma_praline-1.1.0-py2-none-any.whl", "has_sig": false, "md5_digest": "bb1ba2705e3e8ebd9b599616561b6a24", "packagetype": "bdist_wheel", "python_version": "py2", "requires_python": ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.2.*,!=3.3.*,!=3.4.*", "size": 19368, "upload_time": "2018-11-19T15:44:28", "url": "https://files.pythonhosted.org/packages/8d/c3/04a742189a1b49b17cf1a4ee924f07562ff0b6eaf14ce57ea559ba2bda05/ma_praline-1.1.0-py2-none-any.whl" }, { "comment_text": "", "digests": { "md5": "51ab3ff27e30c1cf9fdab1f27a544b44", "sha256": "0ff6d647cc1a9e2748f636bc1f56b75c9a25188982284cfb99b777d4bc194668" }, "downloads": -1, "filename": "ma_praline-1.1.0-py3-none-any.whl", "has_sig": false, "md5_digest": "51ab3ff27e30c1cf9fdab1f27a544b44", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.2.*,!=3.3.*,!=3.4.*", "size": 19369, "upload_time": "2018-11-19T15:44:30", "url": "https://files.pythonhosted.org/packages/41/87/e3b9205ad662095cd4086ba640d87e77370fa8cbb1e844a0b0519c771f73/ma_praline-1.1.0-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "b3e2b725dcab21585733a9977397f743", "sha256": "b653a617a39197dc5d448ac9640731ad1bb78f06b915d59fb4886cfd3640dcb6" }, "downloads": -1, "filename": "ma-praline-1.1.0.tar.gz", "has_sig": false, "md5_digest": "b3e2b725dcab21585733a9977397f743", "packagetype": "sdist", "python_version": "source", "requires_python": ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.2.*,!=3.3.*,!=3.4.*", "size": 11230, "upload_time": "2018-11-19T15:36:00", "url": "https://files.pythonhosted.org/packages/3f/3a/c0a527a5cb5e85559c64e92b88dd5d68fc78fd3f70a266d65f441a7d5dff/ma-praline-1.1.0.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "bb1ba2705e3e8ebd9b599616561b6a24", "sha256": "dbe24ca22cf8b02fa7d33c0873f52f1121392ab7c890425a7c755b4fbc9bc459" }, "downloads": -1, "filename": "ma_praline-1.1.0-py2-none-any.whl", "has_sig": false, "md5_digest": "bb1ba2705e3e8ebd9b599616561b6a24", "packagetype": "bdist_wheel", "python_version": "py2", "requires_python": ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.2.*,!=3.3.*,!=3.4.*", "size": 19368, "upload_time": "2018-11-19T15:44:28", "url": "https://files.pythonhosted.org/packages/8d/c3/04a742189a1b49b17cf1a4ee924f07562ff0b6eaf14ce57ea559ba2bda05/ma_praline-1.1.0-py2-none-any.whl" }, { "comment_text": "", "digests": { "md5": "51ab3ff27e30c1cf9fdab1f27a544b44", "sha256": "0ff6d647cc1a9e2748f636bc1f56b75c9a25188982284cfb99b777d4bc194668" }, "downloads": -1, "filename": "ma_praline-1.1.0-py3-none-any.whl", "has_sig": false, "md5_digest": "51ab3ff27e30c1cf9fdab1f27a544b44", "packagetype": "bdist_wheel", "python_version": "py3", "requires_python": ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.2.*,!=3.3.*,!=3.4.*", "size": 19369, "upload_time": "2018-11-19T15:44:30", "url": "https://files.pythonhosted.org/packages/41/87/e3b9205ad662095cd4086ba640d87e77370fa8cbb1e844a0b0519c771f73/ma_praline-1.1.0-py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "b3e2b725dcab21585733a9977397f743", "sha256": "b653a617a39197dc5d448ac9640731ad1bb78f06b915d59fb4886cfd3640dcb6" }, "downloads": -1, "filename": "ma-praline-1.1.0.tar.gz", "has_sig": false, "md5_digest": "b3e2b725dcab21585733a9977397f743", "packagetype": "sdist", "python_version": "source", "requires_python": ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.2.*,!=3.3.*,!=3.4.*", "size": 11230, "upload_time": "2018-11-19T15:36:00", "url": "https://files.pythonhosted.org/packages/3f/3a/c0a527a5cb5e85559c64e92b88dd5d68fc78fd3f70a266d65f441a7d5dff/ma-praline-1.1.0.tar.gz" } ] }