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        "description": "# pixel-mask-gen\nPython utility to generate a bad pixel mask from a set of calibration images.\n\nAuthors: Matt Daily, Raleigh Littles, Curtis McCully\n\n## Installation\n### From PyPi\nThis package is available via PyPi, and can be installed via pip:\n\n`pip3 install lco-bpm-maker`\n\n### From Github\nTo install the tool, clone this repository and run:\n\n```\ncd pixel-mask-gen\npython3 setup.py install\n```\n\n## Tests\nTo run the unit tests, simply run:\n\n`python3 setup.py test`\n\n## Usage\nOnce you've installed the tool, it can be run simply by:\n\n`lco_bpm_maker`\n\n```\nusage: lco_bpm_maker [-h] [--log-level {DEBUG,INFO,WARNING,ERROR,CRITICAL}]\n                     [--dark-current-threshold DARK_CURRENT_THRESHOLD]\n                     [--flat-sigma-threshold FLAT_SIGMA_THRESHOLD]\n                     [--bias-sigma-threshold BIAS_SIGMA_THRESHOLD]\n                     input_directory output_directory\n\nCreate a bad pixel mask from a set of calibration frames.\n\npositional arguments:\n  input_directory       Input directory of calibration images\n\n  output_directory      Output directory for bad pixel mask\n\noptional arguments:\n  -h, --help            show this help message and exit\n\n  --log-level {DEBUG,INFO,WARNING,ERROR,CRITICAL}\n                        Logging level to be displayed\n\n  --dark-current-threshold DARK_CURRENT_THRESHOLD\n                        Threshold for pixel dark current when flagging bad\n                        pixels in dark frames. Pixels above this will be\n                        flagged. Default = 20 [electrons/second]\n\n  --flat-sigma-threshold FLAT_SIGMA_THRESHOLD\n                        Number of standard deviations from the median of the\n                        combined flat image for a pixel to be flagged. Default = 10\n\n  --bias-sigma-threshold BIAS_SIGMA_THRESHOLD\n                        Number of standard deviations from the median of the\n                        combined bias image for a pixel to be flagged. Default = 10\n                        \n  --fpack               Flag to fpack output BPM\n\n```",
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