{ "info": { "author": "kimlab.org", "author_email": "alex.strokach@utoronto.ca", "bugtrack_url": null, "classifiers": [ "License :: OSI Approved :: MIT License", "Programming Language :: Python :: 3 :: Only", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "# KMTools\n\n[![anaconda](https://img.shields.io/conda/dn/kimlab/kmtools.svg)](https://anaconda.org/kimlab/kmtools/)\n[![docs](https://img.shields.io/badge/docs-v0.0.27-blue.svg?version=latest)](https://kimlab.gitlab.io/kmtools/v0.0.27/)\n[![build status](https://gitlab.com/kimlab/kmtools/badges/v0.0.27/build.svg)](https://gitlab.com/kimlab/kmtools/commits/v0.0.27/)\n[![coverage report](https://gitlab.com/kimlab/kmtools/badges/v0.0.27/coverage.svg)](https://kimlab.gitlab.io/kmtools/v0.0.27/htmlcov/)\n\nBits of reusable code to make our lives easier.\n\nFollows the *Whole Sort of General Mish Mash* design principle.\n\n## Contents\n\n- [Tools](#tools)\n - [DB tools](#db-tools)\n - [DF tools](#df-tools)\n - [PY tools](#py-tools)\n - [Sequence tools](#sequence-tools)\n - [Structure tools](#structure-tools)\n - [System tools](#system-tools)\n- [Contributing](#contributing)\n\n## Tools\n\n### Structure tools\n\nUsing [kmbio](https://github.com/kimlaborg/kmbio) instead of [biopython](https://github.com/biopython/biopython) leads to substantially better performance (> 2x with lots of room for improvement).\n\n#### To do\n\n- [ ] Cythonize more bottlenecks to improve performance.\n- [ ] Add Python / Cython code for generating biological assemblies.\n\n## Contributing\n\n- Make sure all tests pass before merging into master.\n- Follow the PEP8 / PyFlake / Flake8 / etc. guidelines.\n- Add tests for new code.\n- Try to document things.\n- Break any / all of the above if you have a good reason.\n\n\n", "description_content_type": "", "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://gitlab.com/kimlab/kmtools", "keywords": "", "license": "MIT", "maintainer": "", "maintainer_email": "", "name": "kmtools", "package_url": "https://pypi.org/project/kmtools/", "platform": "", "project_url": "https://pypi.org/project/kmtools/", "project_urls": { "Homepage": "https://gitlab.com/kimlab/kmtools" }, "release_url": "https://pypi.org/project/kmtools/0.0.27/", "requires_dist": null, "requires_python": "", "summary": "Bits of reusable code to make our lives easier.", "version": "0.0.27" }, "last_serial": 4098583, "releases": { "0.0.26": [ { "comment_text": "", "digests": { "md5": "79f1355044170ae67a6a606c9ef9b79d", "sha256": "64b1c2d83ce144dbc326731fec3de114c0f292d9a945c532484193ef63236e50" }, "downloads": -1, "filename": "kmtools-0.0.26-py2.py3-none-any.whl", "has_sig": false, "md5_digest": "79f1355044170ae67a6a606c9ef9b79d", "packagetype": "bdist_wheel", "python_version": "py2.py3", "requires_python": null, "size": 97001, "upload_time": "2018-04-19T20:12:59", "url": "https://files.pythonhosted.org/packages/53/fb/f7f26257c8a89b3b5655c12e5c18682c666c1bc91cd3165b9bc74888232a/kmtools-0.0.26-py2.py3-none-any.whl" } ], "0.0.27": [ { "comment_text": "", "digests": { "md5": "88d1fe487af6ff4d6d2f6b2ca965fdb6", "sha256": "9ae6954e4676209e1eb9794e09d945f97416c09d3632b606bbb4c7a8f9c87437" }, "downloads": -1, "filename": "kmtools-0.0.27-py2.py3-none-any.whl", "has_sig": false, "md5_digest": "88d1fe487af6ff4d6d2f6b2ca965fdb6", "packagetype": "bdist_wheel", "python_version": "py2.py3", "requires_python": null, "size": 97127, "upload_time": "2018-07-24T21:45:43", "url": "https://files.pythonhosted.org/packages/d6/48/e1e5f2b017b2062a7cbbfeaee5d2701cc57f8bf292964874fe2dcd2995f5/kmtools-0.0.27-py2.py3-none-any.whl" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "88d1fe487af6ff4d6d2f6b2ca965fdb6", "sha256": "9ae6954e4676209e1eb9794e09d945f97416c09d3632b606bbb4c7a8f9c87437" }, "downloads": -1, "filename": "kmtools-0.0.27-py2.py3-none-any.whl", "has_sig": false, "md5_digest": "88d1fe487af6ff4d6d2f6b2ca965fdb6", "packagetype": "bdist_wheel", "python_version": "py2.py3", "requires_python": null, "size": 97127, "upload_time": "2018-07-24T21:45:43", "url": "https://files.pythonhosted.org/packages/d6/48/e1e5f2b017b2062a7cbbfeaee5d2701cc57f8bf292964874fe2dcd2995f5/kmtools-0.0.27-py2.py3-none-any.whl" } ] }