{ "info": { "author": "Albert Zhou", "author_email": "j.zhou.3@bham.ac.uk", "bugtrack_url": null, "classifiers": [ "License :: OSI Approved :: GNU Lesser General Public License v3 (LGPLv3)", "Operating System :: POSIX", "Programming Language :: Python :: 2", "Topic :: Scientific/Engineering :: Bio-Informatics", "Topic :: Software Development :: Libraries" ], "description": "# Kagami Library\n\nThe Kagami library is a Python package to **reinvent the wheel** and make some developments easier. It's neither designed as user-friendly nor for the purpose for a broad public to use. It may include documents in the future. But nothing under plan yet. Think twice before using it in your project.\n\nThe Kagami library is under rapid development. Compatible between the major releases are not guaranteed. Be careful about the version required.\n\nThe Kagami library supports Python 2.7 and will soon be compatible with Python 3. The Kagami library is distributed under the GNU Lesser General Public License v3.0.\n\n## Dependencies\n\nKagami requires:\n\n- Python (>= 2.7.14)\n- numpy (>= 1.14.3)\n- tables (>= 3.4.4)\n- requests (>= 2.20.1)\n- bidict (>= 0.17.5)\n- pytest (>= 4.0.0)\n\nTo use RWrapper, you will also need:\n\n- rpy2 (== 2.8.6)\n- R (>= 3.3.3)\n\nTo use pytest coverage and profiling, you will also need:\n\n- pytest-cov (>= 2.6.0)\n- pytest-profiling (>= 1.3.0)\n\nLower versions may work but have not been tested.\n\n## Installation\n\nUsing pip:\n```bash\npip install kagami\n```\n\nUsing Pipenv:\n```bash\npipenv install kagami\n```\n\nUsing Docker\n```bash\ndocker run -v $(pwd):/home --rm albertaki/kagami-core:latest \n```\n\n## Testing\n\n```python\nimport kagami\nkagami.test()\n\n=================================== test session starts =================================== \nplatform darwin -- Python 2.7.15, pytest-3.7.0, py-1.5.4, pluggy-0.7.1\nrootdir: Kagami, inifile:\nplugins: profiling-1.3.0, cov-2.5.1\ncollected 47 items\n\nkagami/tests/core_tests/test_etc.py ...... [ 12%]\nkagami/tests/core_tests/test_functional.py ..... [ 23%]\nkagami/tests/core_tests/test_path.py ... 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