{ "info": { "author": "Martijn Vermaat", "author_email": "martijn@vermaat.name", "bugtrack_url": null, "classifiers": [ "Development Status :: 3 - Alpha", "Intended Audience :: Developers", "Intended Audience :: Science/Research", "Operating System :: OS Independent", "Programming Language :: Python", "Programming Language :: Python :: 2", "Programming Language :: Python :: 2.6", "Programming Language :: Python :: 2.7", "Programming Language :: Python :: 3", "Programming Language :: Python :: 3.3", "Programming Language :: Python :: 3.4", "Topic :: Scientific/Engineering" ], "description": "A Python implementation of the interval binning scheme\n======================================================\n\nThese are some utility functions for working with the interval binning scheme\nas used in the `UCSC Genome Browser\n`_. This scheme can be used to\nimplement fast overlap-based querying of intervals, essentially mimicking an\n`R-tree `_ index.\n\nNote that some database systems natively support spatial index methods such as\nR-trees. See for example the `PostGIS `_ extension for\nPostgreSQL.\n\nAlthough in principle the method can be used for binning any kind of\nintervals, be aware that the largest position supported by this implementation\nis 2^29 (which covers the longest human chromosome).\n\n\nUsage\n-----\n\nSee the `documentation `_.\n\n\nInstallation\n------------\n\nTo install the latest release via PyPI using pip::\n\n pip install interval-binning", "description_content_type": null, "docs_url": null, "download_url": "UNKNOWN", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/martijnvermaat/binning", "keywords": "bioinformatics", "license": "MIT License", "maintainer": null, "maintainer_email": null, "name": "interval-binning", "package_url": "https://pypi.org/project/interval-binning/", "platform": "any", "project_url": "https://pypi.org/project/interval-binning/", "project_urls": { "Download": "UNKNOWN", "Homepage": "https://github.com/martijnvermaat/binning" }, "release_url": "https://pypi.org/project/interval-binning/1.0.0/", "requires_dist": null, "requires_python": null, "summary": "A Python implementation of the interval binning scheme", "version": "1.0.0" }, "last_serial": 1790736, "releases": { "1.0.0": [ { "comment_text": "", "digests": { "md5": "02117913533c9f5104da88d56d86f69a", "sha256": "e77b748ecce3dde53c744b873f4accfe3f27061357091c68c903f5d86e914b46" }, "downloads": -1, "filename": "interval-binning-1.0.0.tar.gz", "has_sig": false, "md5_digest": "02117913533c9f5104da88d56d86f69a", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 4793, "upload_time": "2015-10-28T20:27:01", "url": "https://files.pythonhosted.org/packages/0d/6a/46e4b08485af84fc997534744fb8b4e433e7cd341204e1043903171cd3e1/interval-binning-1.0.0.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "02117913533c9f5104da88d56d86f69a", "sha256": "e77b748ecce3dde53c744b873f4accfe3f27061357091c68c903f5d86e914b46" }, "downloads": -1, "filename": "interval-binning-1.0.0.tar.gz", "has_sig": false, "md5_digest": "02117913533c9f5104da88d56d86f69a", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 4793, "upload_time": "2015-10-28T20:27:01", "url": "https://files.pythonhosted.org/packages/0d/6a/46e4b08485af84fc997534744fb8b4e433e7cd341204e1043903171cd3e1/interval-binning-1.0.0.tar.gz" } ] }