{ "info": { "author": "Mark Ivanov & Lev Levitsky", "author_email": "pyteomics@googlegroups.com", "bugtrack_url": null, "classifiers": [ "Intended Audience :: Science/Research", "Programming Language :: Python :: 2.7", "Topic :: Education", "Topic :: Scientific/Engineering :: Bio-Informatics", "Topic :: Scientific/Engineering :: Chemistry", "Topic :: Scientific/Engineering :: Physics", "Topic :: Software Development :: Libraries" ], "description": "groupfilter - a software tool for efficient filtering of Morpheus search engine results\n---------------------------------------------------------------------------------------\n\n**groupfilter** is a module based on the\n**pyteomics** (http://pythonhosted.org/pyteomics/) package that\nincreases the number of identifications above FDR threshold for Morpheus search engine results.\n\nDependencies\n------------\n\n- pyteomics (>= 3.0)\n- numpy\n\nHow to install\n--------------\n\n - best way to install **groupfilter** is with ``pip``: ``pip install numpy\n pyteomics groupfilter``.\n - alternatively, you can download source code for each library and run\n ``python setup.py install`` for each of them.\n - There may be other ways to install ``numpy``, depending on your platform.\n\nHow to use\n--------------\n\n``groupfilter.py file1.tsv [file2.tsv ...] db.fasta``\n\npositional arguments:\n files list of Morpheus PSM files\n\n db.fasta path to FASTA file\n\nLinks\n-----\n\n- PyPI: https://pypi.python.org/pypi/groupfilter\n- BitBucket repo & issue tracker: https://bitbucket.org/levitsky/groupfilter\n- Mailing list: pyteomics@googlegroups.com", "description_content_type": null, "docs_url": null, "download_url": null, "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "http://hg.theorchromo.ru/groupfilter", "keywords": null, "license": "License :: OSI Approved :: Apache Software License", "maintainer": null, "maintainer_email": null, "name": "groupfilter", "package_url": "https://pypi.org/project/groupfilter/", "platform": "UNKNOWN", "project_url": "https://pypi.org/project/groupfilter/", "project_urls": { "Homepage": "http://hg.theorchromo.ru/groupfilter" }, "release_url": "https://pypi.org/project/groupfilter/0.2/", "requires_dist": null, "requires_python": null, "summary": "A software tool for efficient filtering of Morpheus search engine results.", "version": "0.2" }, "last_serial": 1494350, "releases": { "0.1": [ { "comment_text": "", "digests": { "md5": "ce93460c105d986b6fc2b975aa9e7a5d", "sha256": "2b90c229ff3b4f4eda38501707aee01fe5ba872983fbbd95da71790e26b7c2d4" }, "downloads": -1, "filename": "groupfilter-0.1.tar.gz", "has_sig": false, "md5_digest": "ce93460c105d986b6fc2b975aa9e7a5d", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 3202, "upload_time": "2015-04-03T14:49:17", "url": "https://files.pythonhosted.org/packages/3c/29/f9d5ac7c050991c252d5aa858b81432bab334caf9d0bbaf128b24f7f2dc8/groupfilter-0.1.tar.gz" } ], "0.2": [ { "comment_text": "", "digests": { "md5": "676c027bfd602a0701155060293561e1", "sha256": "555bfe1d14630ec32aaf91673fc793cd8df8ff755acaa30f1514bea95d12f3ac" }, "downloads": -1, "filename": "groupfilter-0.2.tar.gz", "has_sig": false, "md5_digest": "676c027bfd602a0701155060293561e1", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 3524, "upload_time": "2015-04-07T15:07:54", "url": "https://files.pythonhosted.org/packages/0b/eb/de66abed0384adf01b91cf474ff1cfd7876c14a94d58edb0bdcdd01163cb/groupfilter-0.2.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "676c027bfd602a0701155060293561e1", "sha256": "555bfe1d14630ec32aaf91673fc793cd8df8ff755acaa30f1514bea95d12f3ac" }, "downloads": -1, "filename": "groupfilter-0.2.tar.gz", "has_sig": false, "md5_digest": "676c027bfd602a0701155060293561e1", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 3524, "upload_time": "2015-04-07T15:07:54", "url": "https://files.pythonhosted.org/packages/0b/eb/de66abed0384adf01b91cf474ff1cfd7876c14a94d58edb0bdcdd01163cb/groupfilter-0.2.tar.gz" } ] }