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        "author": "Ian Korf",
        "author_email": "ifkorf@gmail.com",
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        "description": "grimoire\n========\n\nThe grimoire pacakage contains libraries and scripts for Biological sequence analysis.\n\nDisclaimer\n----------\n\nThe current developent is highly volatile and not ready for public consumption.\n\nDesign Considerations\n---------------------\n\nThe code is designed with the folllowing analyses in mind:\n\n+ Gene structure prediction using hidden Markov models and variants\n+ Genome annotation quality control\n+ Structure-function relationships in sequences (e.g. IME)\n\n\nPrograms\n--------\n\nProgram names are themed after spell names from the classic RPG\n\"Wizardry: Proving Grounds of the Mad Overlord.\"\n\n| Name      | Meaning    | Function                               |\n|:----------|:-----------|:---------------------------------------|\n| calfo     | x-ray      | genome annotation reporter\n| kandi     | locate     | genome annotation viewer\n| haman     | change     | genome slicer\n| milwa     | light      | hmm buider\n| dumapic   | clarity    | hmm grapher \n| halito    | fire       | basic hmm decoder\n| mahalito  | big fire   | 2-pass gene decoder\n| morlis    | fear       | annotation comparer (simple)\n| mogref    | iron       | sequence generator\n| mamorlis  | great fear | (planned complex annotation comparer)\n| mahaman   | change     | (planned multi-genome slicer)\n| malor     | apport     | (planned genome lifter)\n| lahalito  | torch      | (planned full genome decoder)\n| tiltowait | explosion  | (planned multi-genome decoder)\n| zilwan    | dispel     | (planned profile/alignment decoder)\n| latumapic | identify   | (planned region-ifier)\n\n\nContributors\n------------\n\n+ Ian Korf (iankorf)\n+ Hannah Lyman (hslyman)\n+ Alex Kramer (aklreaxmer)\n+ Qijia Liu (joyliu-q)\n+ Jack Yu (Angraygs)\n\nAcknowledgements\n----------------\n\nThanks to M. O. Trebor and E. W. Werdna for inspiration.\n\n\n\n\n",
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