{ "info": { "author": "", "author_email": "", "bugtrack_url": null, "classifiers": [], "description": "Experimental Glue medical plugin\n================================\n\n|Build Status| |Build status|\n\nRequirements\n------------\n\nNote that this plugin requires `glue `__ to be\ninstalled - see `this\npage `__ for\ninstructions on installing glue.\n\nIn addition, this plugin requires the\n`GDCM `__ and\n`pydicom `__ packages to be\ninstalled. If you are using conda, you can easily install these with:\n\n::\n\n conda install -c conda-forge gdcm pydicom\n\nInstalling\n----------\n\nTo install the latest developer version of the plugin from the git\nrepository, you can do:\n\n::\n\n pip install https://github.com/glue-viz/glue-medical/archive/master.zip\n\nThis will auto-register the plugin with Glue.\n\nUsing\n-----\n\nAt the moment, this plugin provides a reader for DICOM files. You can\ngive glue either a DICOM file or a directory containing DICOM files. For\nexample, you can start glue using:\n\n::\n\n glue mydata.dcm\n\nor\n\n::\n\n glue directory_with_dicom_files\n\nand you can also load files from inside glue. It is not yet possible to\nload a directory from the 'Open Data Set' menu in glue.\n\nAt the moment, if all the shapes of the DICOM files match inside the\ndirectory, we combine the arrays into an array with a higher\ndimensionality (for example we combine 2d arrays into a single 3d\narray). In future, we will make it possible for users to control this\nbehavior.\n\nTesting\n-------\n\nTo run the tests, do:\n\n::\n\n py.test glue_medical\n\nat the root of the repository. This requires the\n`pytest `__ module to be installed.\n\n.. |Build Status| image:: https://travis-ci.org/glue-viz/glue-medical.svg\n :target: https://travis-ci.org/glue-viz/glue-medical?branch=master\n.. |Build status| image:: https://ci.appveyor.com/api/projects/status/2yu53cb15ifilio6/branch/master?svg=true\n :target: https://ci.appveyor.com/project/glue-viz/glue-medical/branch/master\n\n\n", "description_content_type": "", "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/glue-viz/glue-medical", "keywords": "", "license": "", "maintainer": "", "maintainer_email": "", "name": "glue-medical", "package_url": "https://pypi.org/project/glue-medical/", "platform": "", "project_url": "https://pypi.org/project/glue-medical/", "project_urls": { "Homepage": "https://github.com/glue-viz/glue-medical" }, "release_url": "https://pypi.org/project/glue-medical/0.2/", "requires_dist": [ "numpy", "glue-core (>=0.12)", "pydicom", "pytest ; extra == 'test'", "pytest-cov ; extra == 'test'", "pytest-faulthandler ; extra == 'test'" ], "requires_python": "", "summary": "Plugin for glue to support medical data", "version": "0.2" }, "last_serial": 5502113, "releases": { "0.1": [ { "comment_text": "", "digests": { "md5": "27c4f13c8141a78771bce70165fc5caa", "sha256": "c2878c86ec45084e8304a2bab02849d5e4808f1e35cd68ebdf4b1243ad4bed03" }, "downloads": -1, "filename": "glue_medical-0.1-py2.py3-none-any.whl", "has_sig": false, "md5_digest": "27c4f13c8141a78771bce70165fc5caa", "packagetype": "bdist_wheel", "python_version": "py2.py3", "requires_python": null, "size": 69568, "upload_time": "2017-10-25T19:52:58", "url": "https://files.pythonhosted.org/packages/13/80/e42f7708754afdfe2977821e9790d3472a769031fe9efb645cb04a5bacd3/glue_medical-0.1-py2.py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "9d15eedf4abf82d67b24e05c2b20da25", "sha256": "9d4d3f14397c53b571316ab1416a6c562d0ae0ba23cbacfade1e4a8c642da31b" }, "downloads": -1, "filename": "glue-medical-0.1.tar.gz", "has_sig": false, "md5_digest": "9d15eedf4abf82d67b24e05c2b20da25", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 61779, "upload_time": "2017-10-25T19:53:00", "url": "https://files.pythonhosted.org/packages/bb/83/6ff636d735a51bfa5edf5147a11ee35348799644d08377b85c6ff20cd358/glue-medical-0.1.tar.gz" } ], "0.1.1": [ { "comment_text": "", "digests": { "md5": "f753c88d4ede15b9693e2b8dae70e27e", "sha256": "bdc42324cece2c3b295f9961fca89f89ec9a2c69c69ab3309e240f02b52f9ffb" }, "downloads": -1, "filename": "glue_medical-0.1.1-py2.py3-none-any.whl", "has_sig": false, "md5_digest": "f753c88d4ede15b9693e2b8dae70e27e", "packagetype": "bdist_wheel", "python_version": "py2.py3", "requires_python": null, "size": 69623, "upload_time": "2017-10-26T13:44:01", "url": "https://files.pythonhosted.org/packages/bf/29/7cf55a0b2bc35be618c732b488df1153cb37c01e1614e565d93ee1c085f4/glue_medical-0.1.1-py2.py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "02b26db9581f6560424e7291c27693ec", "sha256": "b074e16d1b0d512f54c36df2ddbef26fe6762a630a829e5692a6a9f5a5b7a5e0" }, "downloads": -1, "filename": "glue-medical-0.1.1.tar.gz", "has_sig": false, "md5_digest": "02b26db9581f6560424e7291c27693ec", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 61827, "upload_time": "2017-10-26T13:44:03", "url": "https://files.pythonhosted.org/packages/0e/34/9a2b3b6f478d739cea555735fd54381d5e8cfefc6c37f9d54faf24c03c65/glue-medical-0.1.1.tar.gz" } ], "0.2": [ { "comment_text": "", "digests": { "md5": "2579b3966fb0124659dda3be1ef8128d", "sha256": "00829f690b525480dbd249a0a4fe7e21affb9a00930acd1adad589331fafd9fa" }, "downloads": -1, "filename": "glue_medical-0.2-py2.py3-none-any.whl", "has_sig": false, "md5_digest": "2579b3966fb0124659dda3be1ef8128d", "packagetype": "bdist_wheel", "python_version": "py2.py3", "requires_python": null, "size": 69033, "upload_time": "2019-07-08T16:45:12", "url": "https://files.pythonhosted.org/packages/0e/d8/ddc7b6b741f54309929d554da27a86e4c28c957eaba24612cff5e176341f/glue_medical-0.2-py2.py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "117f74fb6cee39ba000d0570494b4be3", "sha256": "ef05e0c6c5a15fd72d84d1d6c19148a47ff9992674168efb3590a06c34ef5b42" }, "downloads": -1, "filename": "glue-medical-0.2.tar.gz", "has_sig": false, "md5_digest": "117f74fb6cee39ba000d0570494b4be3", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 64917, "upload_time": "2019-07-08T16:45:14", "url": "https://files.pythonhosted.org/packages/87/e3/1b38283f7c719c7b7901c8327137f7a6cb6edf8406992017fbbca4788fd2/glue-medical-0.2.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "2579b3966fb0124659dda3be1ef8128d", "sha256": "00829f690b525480dbd249a0a4fe7e21affb9a00930acd1adad589331fafd9fa" }, "downloads": -1, "filename": "glue_medical-0.2-py2.py3-none-any.whl", "has_sig": false, "md5_digest": "2579b3966fb0124659dda3be1ef8128d", "packagetype": "bdist_wheel", "python_version": "py2.py3", "requires_python": null, "size": 69033, "upload_time": "2019-07-08T16:45:12", "url": "https://files.pythonhosted.org/packages/0e/d8/ddc7b6b741f54309929d554da27a86e4c28c957eaba24612cff5e176341f/glue_medical-0.2-py2.py3-none-any.whl" }, { "comment_text": "", "digests": { "md5": "117f74fb6cee39ba000d0570494b4be3", "sha256": "ef05e0c6c5a15fd72d84d1d6c19148a47ff9992674168efb3590a06c34ef5b42" }, "downloads": -1, "filename": "glue-medical-0.2.tar.gz", "has_sig": false, "md5_digest": "117f74fb6cee39ba000d0570494b4be3", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 64917, "upload_time": "2019-07-08T16:45:14", "url": "https://files.pythonhosted.org/packages/87/e3/1b38283f7c719c7b7901c8327137f7a6cb6edf8406992017fbbca4788fd2/glue-medical-0.2.tar.gz" } ] }