{ "info": { "author": "Alex MacLean", "author_email": "maclean199@gmail.com", "bugtrack_url": null, "classifiers": [], "description": "[![Build Status](https://travis-ci.org/AAFC-MBB/GFlow.svg?branch=master)](https://travis-ci.org/AAFC-MBB/GFlow)\nGFlow\n========================\n\nThis is a command line interface application that allows datasets and a workflow to be specified in a config file and then have the workflow executed on an instance of Galaxy.\n\nInstallation\n------------\n\nFrom the source directory:\n\n $ pip install -r requirements.txt\n $ python setup.py install \n\nConfiguration\n-------------\n\nMake a copy of the sample config file in ``config/`` and set the parameters in it as desired:\n\n $ cp config/config.yml.sample config/config.yml\n\nUsage\n-----\n\nThen, execute:\n\n $ gflow config/config.yml\n\nOr, if executing from the source directory without having installed the tool:\n\n $ export PYTHONPATH=$PYTHONPATH:$PWD\n $ ./scripts/gflow config/config.yml\n \nTests\n-----\n\nA small number of data files and workflow files have been included in ``data/`` and ``workflow/`` for testing purposes.\nAfter setting the ```GALAXY_URL``` and ```GALAXY_API_KEY``` environment variables, execute the tests with:\n\n $ python setup.py test", "description_content_type": null, "docs_url": null, "download_url": "https://github.com/AAFC-MBB/gflow/archive/0.1.tar.gz", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/AAFC-MBB/gflow", "keywords": "Galaxy,Workflow,Python,Bioblend", "license": "UNKNOWN", "maintainer": null, "maintainer_email": null, "name": "gflow", "package_url": "https://pypi.org/project/gflow/", "platform": "UNKNOWN", "project_url": "https://pypi.org/project/gflow/", "project_urls": { "Download": "https://github.com/AAFC-MBB/gflow/archive/0.1.tar.gz", "Homepage": "https://github.com/AAFC-MBB/gflow" }, "release_url": "https://pypi.org/project/gflow/0.1/", "requires_dist": null, "requires_python": null, "summary": "Command line tool for running Galaxy workflows.", "version": "0.1" }, "last_serial": 2047422, "releases": { "0.1": [ { "comment_text": "", "digests": { "md5": "a6778f01bc845c5cd910584a5a5d66db", "sha256": "f2b2e9ba6fbc97593d3ce3dd82bebdf7d9d7a5068cc6180f0d5ad5c67bd7ed36" }, "downloads": -1, "filename": "gflow-0.1.tar.gz", "has_sig": false, "md5_digest": "a6778f01bc845c5cd910584a5a5d66db", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 6170, "upload_time": "2016-04-05T15:19:30", "url": "https://files.pythonhosted.org/packages/c1/86/632d0e419376f60dea496912115a7af3a065e64c33647827300db86a44f9/gflow-0.1.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "a6778f01bc845c5cd910584a5a5d66db", "sha256": "f2b2e9ba6fbc97593d3ce3dd82bebdf7d9d7a5068cc6180f0d5ad5c67bd7ed36" }, "downloads": -1, "filename": "gflow-0.1.tar.gz", "has_sig": false, "md5_digest": "a6778f01bc845c5cd910584a5a5d66db", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 6170, "upload_time": "2016-04-05T15:19:30", "url": "https://files.pythonhosted.org/packages/c1/86/632d0e419376f60dea496912115a7af3a065e64c33647827300db86a44f9/gflow-0.1.tar.gz" } ] }