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"author": "Global Alliance for Genomics and Health",
"author_email": "theglobalalliance@genomicsandhealth.org",
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"Programming Language :: Python :: 2.7",
"Programming Language :: Python :: 3.6",
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"description": "# Schemas for the Data Object Service (DOS) API\n![](\"https://www.ga4gh.org/gfx/GA-logo-horizontal-tag-RGB.svg\")
\n[](https://travis-ci.org/ga4gh/data-object-service-schemas)\n[](https://raw.githubusercontent.com/ga4gh/data-object-service-schemas/master/openapi/data_object_service.swagger.yaml)\n[](https://data-object-service.readthedocs.io/en/latest)\n\n\n[View the schemas in Swagger UI](http://ga4gh.github.io/data-object-service-schemas)\n\nThe goal of DOS is to create a generic API on top of existing object storage systems\nso workflow systems can access data in a single, standard way regardless of where it's\nstored. It's maintained by the [GA4GH Cloud Workstream](https://github.com/ga4gh/wiki/wiki).\n\n## Key features\n\nThe API is split into two sections:\n\n* **data object management**, which enables the creation, updating, deletion, versioning,\n and unique identification of files and data bundles (flat collections of files); and\n* **data object querying**, which can locate data objects across different cloud environments\n and DOS implementations.\n\n## Getting started\n\nInstalling is as easy as:\n\n```\n$ pip install ga4gh-dos-schemas\n```\n\nThis will install both a demonstration server and a Python client that will allow you to\nmanage Data Objects in a local server. You can start the demo server using `ga4gh_dos_server`.\nThis starts a Data Object Service at http://localhost:8080.\n\n```\nwget http://hgdownload.cse.ucsc.edu/goldenPath/hg38/chromosomes/chr22.fa.gz\nmd5sum chr22.fa.gz\n# 41b47ce1cc21b558409c19b892e1c0d1 chr22.fa.gz\ncurl -X POST -H 'Content-Type: application/json' \\\n --data '{\"data_object\":\n {\"id\": \"hg38-chr22\",\n \"name\": \"Human Reference Chromosome 22\",\n \"checksums\": [{\"checksum\": \"41b47ce1cc21b558409c19b892e1c0d1\", \"type\": \"md5\"}],\n \"urls\": [{\"url\": \"http://hgdownload.cse.ucsc.edu/goldenPath/hg38/chromosomes/chr22.fa.gz\"}],\n \"size\": \"12255678\"}}' http://localhost:8080/ga4gh/dos/v1/dataobjects\n# We can then get the newly created Data Object by id\ncurl http://localhost:8080/ga4gh/dos/v1/dataobjects/hg38-chr22\n# Or by checksum!\ncurl -X GET http://localhost:8080/ga4gh/dos/v1/dataobjects -d checksum=41b47ce1cc21b558409c19b892e1c0d1\n```\n\nFor more on getting started, check out the\n[quickstart guide](https://data-object-service.readthedocs.io/en/latest/quickstart.html)\nor the rest of the documentation at [ReadtheDocs](https://data-object-service.readthedocs.io/en/latest/)!\n\n## Getting involved!\n\nThe Data Object Service Schemas are Apache 2 Licensed Open Source software. Please join us\nin the [issues](https://github.com/ga4gh/data-object-service-schemas/issues) or check out the\ncontributing docs!",
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