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        "author": "haibao tang, brent pedersen; Bo Li",
        "author_email": "bli28@mgh.harvard.edu",
        "bugtrack_url": null,
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            "Development Status :: 3 - Alpha",
            "Intended Audience :: Developers",
            "Intended Audience :: Science/Research",
            "License :: OSI Approved :: BSD License",
            "Operating System :: OS Independent",
            "Programming Language :: Python",
            "Programming Language :: Python :: 2",
            "Programming Language :: Python :: 3",
            "Topic :: Scientific/Engineering"
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        "description": "Fisher's Exact Test\n===================\n\n.. image:: https://travis-ci.org/brentp/fishers_exact_test.svg?branch=master\n    :target: https://travis-ci.org/brentp/fishers_exact_test\n\nSimple, fast implementation of `Fisher's exact test <http://en.wikipedia.org/wiki/Fisher's_exact_test>`_. . For example, for the following table:\n\n============  =====================  =========================\no              Having the property    Not having the property\n============  =====================  =========================\nSelected      12                     5\nNot selected  29                     2\n============  =====================  =========================\n\nPerhaps we are interested in whether there is any difference of property in selected vs. non-selected groups, then we can do the Fisher's exact test.\n\n\nInstallation\n============\nwithin this folder ::\n\n    easy_install .\n\nfrom pypi ::\n\n    easy_install fisher\n\nor from github (contributions welcomed) ::\n\n    git clone git://github.com/brentp/fishers_exact_test.git\n\n\nUsage\n=====\n``fisher.pvalue()`` accepts 4 values corresponding to the 2-by-2 contingency table, returns an object with attributes for left_tail, right_tail, and two_tail p-values\n::\n\n    >>> from fisher import pvalue\n    >>> mat = [[12, 5], [29, 2]]\n    >>> p = pvalue(12, 5, 29, 2)\n    >>> p.left_tail, p.right_tail, p.two_tail  # doctest: +NORMALIZE_WHITESPACE, +ELLIPSIS\n    (0.04455473783507..., 0.994525206021..., 0.0802685520741...)\n\nBenchmark\n=========\nA simple benchmark that calls the Fisher's exact test 1000 times (in ``scripts/rfisher.py``)::\n\n    calling python fisher...\n    iterations/sec: 3000.62526381\n    calling rpy fisher...\n    iterations/sec: 289.225902364\n    calling R directly...\n    iterations/sec: 244.36542276\n\nSo the cython fisher is up to 10 times faster than rpy or R version.\n\n\n",
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        "keywords": "statistics cython",
        "license": "BSD",
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        "name": "fisher-modified",
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        "summary": "Forked from fisher (https://github.com/brentp/fishers_exact_test). Recompile it with Cython 0.29.4 to be compatible with Python 3.7.",
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