{ "info": { "author": "Wouter De Coster", "author_email": "decosterwouter@gmail.com", "bugtrack_url": null, "classifiers": [ "Development Status :: 4 - Beta", "Intended Audience :: Science/Research", "License :: OSI Approved :: MIT License", "Programming Language :: Python :: 3", "Programming Language :: Python :: 3.3", "Programming Language :: Python :: 3.4", "Programming Language :: Python :: 3.5", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "fastq-anonymous\n===============\n\nChange the sequence and identifier of a fastq file to enable sharing of\nconfidential information for troubleshooting\n\nINSTALLATION\n------------\n\n``pip install fastq-anonymous``\n\nUSAGE\n-----\n\n| Reads from stdin and writes to stdout. Sequences are by default\n replaced by random nucleotides.\n| Fastq identifiers and description are also anonymized.\n| Read lengths and quality strings are preserverd.\n\n::\n\n optional arguments:\n -h, --help show this help message and exit\n -v, --version Print version and exit.\n -m, --mask Mask all nucleotides using N\n\nEXAMPLES\n--------\n\n.. code:: bash\n\n cat reads.fastq.gz | fastq-anonymous > anonymous_reads.fastq\n\n gunzip -c reads.fastq.gz | fastq-anonymous > anonymous_reads.fastq\n\n gunzip -c reads.fastq.gz | fastq-anonymous | gzip > anonymous_reads.fastq.gz", "description_content_type": null, "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/wdecoster/fastq-anonymous", "keywords": "nanopore sequencing plotting quality control", "license": "MIT", "maintainer": "", "maintainer_email": "", "name": "fastq-anonymous", "package_url": "https://pypi.org/project/fastq-anonymous/", "platform": "", "project_url": "https://pypi.org/project/fastq-anonymous/", "project_urls": { "Homepage": "https://github.com/wdecoster/fastq-anonymous" }, "release_url": "https://pypi.org/project/fastq-anonymous/1.0.1/", "requires_dist": null, "requires_python": "", "summary": "Change the sequence of a fastq file to enable sharing of confidential information, for troubleshooting\ufffc of tools.", "version": "1.0.1" }, "last_serial": 3262366, "releases": { "1.0.0": [ { "comment_text": "", "digests": { "md5": "2394a0a1891f1a808f5405be3ade3084", "sha256": "305411553a3bc22fbf3399ddb9f4a0a8de0aaeb2aecb6351dee71803ff888bc6" }, "downloads": -1, "filename": "fastq-anonymous-1.0.0.tar.gz", "has_sig": false, "md5_digest": "2394a0a1891f1a808f5405be3ade3084", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 1777, "upload_time": "2017-10-19T08:20:00", "url": "https://files.pythonhosted.org/packages/c4/e8/172db433b885812d2c053ef053263221637b6afdca2e36fda371cd07df4b/fastq-anonymous-1.0.0.tar.gz" } ], "1.0.1": [ { "comment_text": "", "digests": { "md5": "a1836e720f04af4232ca515852e3ffd0", "sha256": "8636162798aa0a69f7e4f3e3ae02fe8aafa559d5ff22f74ce447521355bdbb14" }, "downloads": -1, "filename": "fastq-anonymous-1.0.1.tar.gz", "has_sig": false, "md5_digest": "a1836e720f04af4232ca515852e3ffd0", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 2384, "upload_time": "2017-10-19T09:01:45", "url": "https://files.pythonhosted.org/packages/5c/4c/c41ec18367919df5c093e54d30ed10fb7a71e67dccb8eba7ad872ac5e19b/fastq-anonymous-1.0.1.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "a1836e720f04af4232ca515852e3ffd0", "sha256": "8636162798aa0a69f7e4f3e3ae02fe8aafa559d5ff22f74ce447521355bdbb14" }, "downloads": -1, "filename": "fastq-anonymous-1.0.1.tar.gz", "has_sig": false, "md5_digest": "a1836e720f04af4232ca515852e3ffd0", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 2384, "upload_time": "2017-10-19T09:01:45", "url": "https://files.pythonhosted.org/packages/5c/4c/c41ec18367919df5c093e54d30ed10fb7a71e67dccb8eba7ad872ac5e19b/fastq-anonymous-1.0.1.tar.gz" } ] }