{ "info": { "author": "Steve Davis", "author_email": "steven.davis@fda.hhs.gov", "bugtrack_url": null, "classifiers": [ "Development Status :: 4 - Beta", "Intended Audience :: Developers", "License :: OSI Approved :: BSD License", "Natural Language :: English", "Programming Language :: Python :: 2", "Programming Language :: Python :: 2.7", "Programming Language :: Python :: 3", "Programming Language :: Python :: 3.4", "Programming Language :: Python :: 3.5", "Programming Language :: Python :: 3.6" ], "description": "===============================\nfastatools\n===============================\n\n\n.. Image showing the PyPI version badge - links to PyPI\n.. image:: https://img.shields.io/pypi/v/fastatools.svg\n :target: https://pypi.python.org/pypi/fastatools\n\n.. Image showing the Travis Continuous Integration test status, commented out for now\n.. .. image:: https://img.shields.io/travis/CFSAN-Biostatistics/fastatools.svg\n.. :target: https://travis-ci.org/CFSAN-Biostatistics/fastatools\n\n\n\nTools for working with fasta files.\n\nThe fastatools package was developed by the United States Food\nand Drug Administration, Center for Food Safety and Applied Nutrition.\n\n* Free software\n* Documentation: https://fastatools.readthedocs.io\n* Source Code: https://github.com/CFSAN-Biostatistics/fastatools\n* PyPI Distribution: https://pypi.python.org/pypi/fastatools\n\n\nFeatures\n--------\n\n* Print the lengths of sequences.\n* Determine if two fasta files are equivalent.\n* Fix inconsistent line lengths and inconsistent lowercase.\n* Generate a reverse complement of a fasta file.\n* Extract a slice from a fasta file delimited by primers.\n* Extract a range of positions from a fasta file.\n\n\n\nCiting fastatools\n--------------------------------------\n\nTo cite fastatools, please reference the fastatools GitHub repository:\n\n https://github.com/CFSAN-Biostatistics/fastatools\n\n\nLicense\n-------\n\nSee the LICENSE file included in the fastatools distribution.\n\n\n\n\n\nHistory\n-------\n\n1.2.0 (2018-12-10)\n---------------------\n\n* First public release with docs and automated tests.\n\n1.1.0 (2018-10-25)\n---------------------\n\n* Add range command to extract a range of positions from a fasta file.\n* Add equiv command to check for equivalent fasta files.\n* Add rewrite command to fix line length and uppercase/lowercase inconsistencies.\n\n1.0.0 (2018-09-21)\n---------------------\n\n* Add length command to print the length of all the sequences in fasta files.\n\n\n0.1.0 (2017-11-30)\n---------------------\n\n* Project started.\n", "description_content_type": "", "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/CFSAN-Biostatistics/fastatools", "keywords": "bioinformatics", "license": "BSD", "maintainer": "", "maintainer_email": "", "name": "fastatools", "package_url": "https://pypi.org/project/fastatools/", "platform": "", "project_url": "https://pypi.org/project/fastatools/", "project_urls": { "Homepage": "https://github.com/CFSAN-Biostatistics/fastatools" }, "release_url": "https://pypi.org/project/fastatools/1.2.0/", "requires_dist": null, "requires_python": "", "summary": "Tools for working with fasta files.", "version": "1.2.0" }, "last_serial": 4581558, "releases": { "1.2.0": [ { "comment_text": "", "digests": { "md5": "46530afb7a9ca1375f4b4232add81971", "sha256": "3f9f42eb70c076801d2082bc1feada367d1cc6709721f3449303b459ff48c10a" }, "downloads": -1, "filename": "fastatools-1.2.0.tar.gz", "has_sig": false, "md5_digest": "46530afb7a9ca1375f4b4232add81971", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 17016, "upload_time": "2018-12-10T16:42:12", "url": "https://files.pythonhosted.org/packages/44/f8/27535aa7b3ecf8d54a470280dd2f6ce64d0fb74ac2dc024587ede1ed7523/fastatools-1.2.0.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "46530afb7a9ca1375f4b4232add81971", "sha256": "3f9f42eb70c076801d2082bc1feada367d1cc6709721f3449303b459ff48c10a" }, "downloads": -1, "filename": "fastatools-1.2.0.tar.gz", "has_sig": false, "md5_digest": "46530afb7a9ca1375f4b4232add81971", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 17016, "upload_time": "2018-12-10T16:42:12", "url": "https://files.pythonhosted.org/packages/44/f8/27535aa7b3ecf8d54a470280dd2f6ce64d0fb74ac2dc024587ede1ed7523/fastatools-1.2.0.tar.gz" } ] }