{ "info": { "author": "Damien Farrell", "author_email": "farrell.damien@gmail.com", "bugtrack_url": null, "classifiers": [ "Development Status :: 4 - Beta", "Intended Audience :: Science/Research", "License :: OSI Approved :: GNU General Public License v3 (GPLv3)", "Operating System :: MacOS :: MacOS X", "Operating System :: Microsoft :: Windows", "Operating System :: OS Independent", "Operating System :: POSIX", "Programming Language :: Python :: 2.7", "Programming Language :: Python :: 3.6", "Topic :: Scientific/Engineering :: Bio-Informatics" ], "description": "Background\n----------\n\nepitopepredict provides a standardized programmatic interface and command line tool for\nexecuting multiple epitope prediction methods. Currently this largely consists of interfaces\nto several MHC binding prediction, the results of which can then be processed and visualized\nin a consistent manner. The Tepitope module implements the TEPITOPEPan method is provided as\na 'built in' method. The IEDB tools and netMHCIIpan and mhcflurry are also supported.\nAll of these tools are free for academic use. This software runs on most linux systems.\nUsers are recommended to use the snap package for convenience. This software is under\nactive development particularly with a view to improve the command line and web tools.\n\nDocumentation is at http://epitopepredict.readthedocs.io\n\nSupported methods\n-----------------\n\nTEPITOPEPan\nNetMHCpan\nIEDB MHC tools\nMHCflurry\n\nDependencies\n------------\n\npandas\nbiopython\ntornado\nbokeh\nmhcflurry (optional)\n\nInstallation\n------------\n\npip install epitopepredict\n\nLinks\n-----\n\nhttps://github.com/dmnfarrell/epitopepredict", "description_content_type": "", "docs_url": null, "download_url": "", "downloads": { "last_day": -1, "last_month": -1, "last_week": -1 }, "home_page": "https://github.com/dmnfarrell/epitopepredict", "keywords": "epitope,mhc,immunology,biology", "license": "GPL v3", "maintainer": "", "maintainer_email": "", "name": "epitopepredict", "package_url": "https://pypi.org/project/epitopepredict/", "platform": "", "project_url": "https://pypi.org/project/epitopepredict/", "project_urls": { "Homepage": "https://github.com/dmnfarrell/epitopepredict" }, "release_url": "https://pypi.org/project/epitopepredict/0.4.0/", "requires_dist": null, "requires_python": "", "summary": "Python package for epitope prediction", "version": "0.4.0" }, "last_serial": 4807370, "releases": { "0.1.0": [ { "comment_text": "", "digests": { "md5": "c20bbec618bda5fb9f2fa05d6fc33f7e", "sha256": "4b8afb137ccaf2d7608854e8ef0badd9e6706aa6d401d4dedf0c08a7936f60b8" }, "downloads": -1, "filename": "epitopepredict-0.1.0.tar.gz", "has_sig": false, "md5_digest": "c20bbec618bda5fb9f2fa05d6fc33f7e", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 51983, "upload_time": "2016-04-05T11:37:07", "url": "https://files.pythonhosted.org/packages/c6/16/6a189a10431c163a4b498fe732203b7bdca24c60497460c3b3a8561853d0/epitopepredict-0.1.0.tar.gz" } ], "0.2.0": [ { "comment_text": "", "digests": { "md5": "4924a29ed3ec49a57fb9785450578af8", "sha256": "d7518635fe5d6f2ba393fe5f158d018763b09124959e7e49d151cbc746cf1c75" }, "downloads": -1, "filename": "epitopepredict-0.2.0.tar.gz", "has_sig": false, "md5_digest": "4924a29ed3ec49a57fb9785450578af8", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 439988, "upload_time": "2018-01-16T12:24:22", "url": "https://files.pythonhosted.org/packages/82/63/aec180b7926f41f030e5a6197af5a905f83d0bf0fa0cfd76f570bb7532b2/epitopepredict-0.2.0.tar.gz" } ], "0.3.0": [ { "comment_text": "", "digests": { "md5": "1e5e3b14f747f2f1248eccf985fede02", "sha256": "69d1240b8bdef6696c9e50da7e57ef8a53681e89de362c2cfc185d26fe7d086e" }, "downloads": -1, "filename": "epitopepredict-0.3.0.tar.gz", "has_sig": false, "md5_digest": "1e5e3b14f747f2f1248eccf985fede02", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 6007260, "upload_time": "2018-05-08T19:14:45", "url": "https://files.pythonhosted.org/packages/51/8a/a8fd6e9674c591c50d7d110394824b37787a0208310cc0be7ba97816f274/epitopepredict-0.3.0.tar.gz" } ], "0.4.0": [ { "comment_text": "", "digests": { "md5": "722c574813c5a8d6d7b9792a5878b169", "sha256": "5e1f80755659ae335ff332ef4ddb2d770124177539b084089b7fb56a02f1bd9e" }, "downloads": -1, "filename": "epitopepredict-0.4.0.tar.gz", "has_sig": false, "md5_digest": "722c574813c5a8d6d7b9792a5878b169", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 10821245, "upload_time": "2019-02-11T19:00:12", "url": "https://files.pythonhosted.org/packages/cb/7c/f56949e23280a63058d1baaec08457aa1ee1d2da25a941e884648fed0334/epitopepredict-0.4.0.tar.gz" } ] }, "urls": [ { "comment_text": "", "digests": { "md5": "722c574813c5a8d6d7b9792a5878b169", "sha256": "5e1f80755659ae335ff332ef4ddb2d770124177539b084089b7fb56a02f1bd9e" }, "downloads": -1, "filename": "epitopepredict-0.4.0.tar.gz", "has_sig": false, "md5_digest": "722c574813c5a8d6d7b9792a5878b169", "packagetype": "sdist", "python_version": "source", "requires_python": null, "size": 10821245, "upload_time": "2019-02-11T19:00:12", "url": "https://files.pythonhosted.org/packages/cb/7c/f56949e23280a63058d1baaec08457aa1ee1d2da25a941e884648fed0334/epitopepredict-0.4.0.tar.gz" } ] }