{
    "info": {
        "author": "Erik van Widenfelt",
        "author_email": "ew2789@gmail.com",
        "bugtrack_url": null,
        "classifiers": [
            "Environment :: Web Environment",
            "Framework :: Django",
            "Intended Audience :: Developers",
            "Intended Audience :: Science/Research",
            "License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
            "Operating System :: OS Independent",
            "Programming Language :: Python :: 3.7",
            "Topic :: Internet :: WWW/HTTP",
            "Topic :: Internet :: WWW/HTTP :: Dynamic Content"
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        "description": "|pypi| |actions| |coverage|\n\nedc-identifier\n--------------\n\nAdd research subject identifiers and other useful identifiers to your project\n\nInstallation\n------------\n\nAdd to settings:\n\n.. code-block:: python\n\n    INSTALLED_APPS = [\n        ...\n        'edc_identifier.apps.AppConfig',\n        ...\n    ]\n\nIdentifiers for research subjects\n---------------------------------\n\nCreate subject identifiers.\n\n.. code-block:: python\n\n    from edc_identifier.subject_identifier import SubjectIdentifier\n\n    subject_identifier = SubjectIdentifier(\n        subject_type_name='subject',\n        model='edc_example.enrollment',\n        protocol='000',\n        device_id='99',\n        study_site='40')\n    >>> subject_identifier.identifier\n    '000-40990001-6'\n\n\nMaternal and Infant Identifiers\n-------------------------------\n\nSee also, ``edc_pregnancy`` model mixins ``DeliveryMixin``, ``BirthMixin``.\n\nFor example:\n\n.. code-block:: python\n\n    from edc_identifier.maternal_identifier import MaternalIdentifier\n\n    maternal_identifier = MaternalIdentifier(\n        subject_type_name='maternal',\n        model='edc_example.enrollment',\n        study_site='40',\n        last_name='Carter')\n\n    >>> maternal_identifier.identifier\n    '000-40990001-6'\n\nAdd infants\n\n.. code-block:: python\n\n    >>> maternal_identifier.deliver(2, model='edc_example.maternallabdel')\n    >>> [infant.identifier for infant in maternal_identifier.infants]\n    ['000-40990001-6-25', '000-40990001-6-26']\n\n``maternal_identifier.infants`` is a list of ``InfantIdentifier`` instances\n\nReload class:\n\n.. code-block:: python\n\n    >>> maternal_identifier = MaternalIdentifier(identifier='000-40990001-6')\n    >>> maternal_identifier.identifier\n    '000-40990001-6'\n    >>> [infant.identifier for infant in maternal_identifier.infants]\n    ['000-40990001-6-25', '000-40990001-6-26']\n\nOnly allocate an identifier to one infant of twins:\n\n.. code-block:: python\n\n    >>> maternal_identifier.deliver(2, model='edc_example.maternallabdel', birth_orders='2')\n    >>> [infant.identifier for infant in maternal_identifier.infants]\n    [None, '000-40990001-6-26']\n\nOf triplets, allocate identifiers to the 2nd and 3rd infants only:\n\n.. code-block:: python\n\n    >>> maternal_identifier.deliver(3, model='edc_example.maternallabdel', birth_orders='2,3')\n    >>> [infant.identifier for infant in maternal_identifier.infants]\n    [None, '000-40990001-6-37', '000-40990001-6-38']\n\n\nResearch subject identifier classes can create a Registered Subject instance\n\nSee also ``edc_registration``\n\n``SubjectIdentifier`` by default does not create a ``RegisteredSubject`` instance unless ``create_registration=True``.\n\nBy default, ``MaternalIdentifier`` and ``InfantIdentifier`` create ``RegisteredSubject`` instances that can be updated with full details later with the Delivery and Birth models. Continuing from above:\n\n.. code-block:: python\n\n    maternal_identifier = MaternalIdentifier(identifier='000-40990001-6')\n    maternal_identifier.deliver(1, model='edc_example.maternallabdel', create_registration=True)\n\n    # mother\n    >>> RegisteredSubject.objects.get(subject_identifier='000-40990001-6')\n    <RegisteredSubject '000-40990001-6'>\n\n    # infant is linked to the mother\n    >>> RegisteredSubject.objects.get(linked_identifier='000-40990001-6')\n    <RegisteredSubject '000-40990001-6-10'>\n\n    # infant\n    >>> obj = RegisteredSubject.objects.get(subject_identifier='000-40990001-6-10')\n    >>> obj.first_name\n    'Baby1Carter'  ## generates a temp name until Birth form is added with complete information.\n    >>> obj.relative_identifier\n    '000-40990001-6'\n\n\nSubject type \"Caps\" are enforced by the research subject identifier classes\n\nSee also ``edc_protocol``\n\nLimits on the number of identifiers that can be allocated per subject type are enforced when identifiers are created. ``edc_identifier`` reads the \"caps\" from ``edc_protocol.apps.AppConfig`` linking the subject type, e.g. ``subject``, or ``maternal`` or ``infant``, to the relevant cap and not allowing the number of allocated identifiers to exceed the cap.\n\n(Subject type \"Caps\" still working? needs to be verified)\n\nNumeric Identifiers\n-------------------\n\nThe numeric identifier uses a check-digit and may have a separator if specified.\n\n.. code-block:: python\n\n\tfrom edc_identifier import NumericIdentifier\n\n\tclass MyIdentifier(NumericIdentifier):\n\t\tpass\n\n\t>>> id = MyIdentifier(None)\n\t>>> id\n\tMyIdentifier('00000000018')\n\t>>> next(id)\n\t'00000000026'\n\t>>> next(id)\n\t'00000000034'\n\n\n\t# add a separator\n\tclass MyIdentifier(NumericIdentifier):\n    \tidentifier_pattern = r'^[0-9]{4}\\-[0-9]{4}\\-[0-9]{4}$'\n    \tcheckdigit_pattern = r'^\\-[0-9]{1}$'\n    \tseparator = '-'\n    \tseed = ['3200-0000-0000']\n\n\t>>> id = MyIdentifier(None)\n\t>>> id\n\tMyIdentifier('3200-0000-0001-1')\n\t>>> next(id)\n\t'3200-0000-0002-9'\n\t>>> next(id)\n\t'3200-0000-0003-7'\n\n\t# start from the last identifier, increment is immediate and automatic\n\t>>> id = MyIdentifier('3200-0000-3222-0')\n\t>>> id\n\tMyIdentifier('3200-0000-3223-8')\n\n\nAlphanumeric Identifiers\n------------------------\n\n.. code-block:: python\n\n\tfrom edc_identifier import AlphanumericIdentifier\n\n\tclass MyIdentifier(AlphanumericIdentifier):\n\t\talpha_pattern = r'^[A-Z]{3}$'\n\t\tnumeric_pattern = r'^[0-9]{4}$'\n\t\tseed = ['AAA', '0000']\n\n\t>>> id = MyIdentifier(None)\n\t>>> id\n\tMyIdentifier('AAA00015')\n\nYour identifier will starts with 'AAA0001' plus the checkdigit \"5\". Subsequent calls to next increment like this:\n\n.. code-block:: python\n\n\t>>> print(next(id))\n\tAAA00023\n\t>>> print(next(id))\n\tAAA00031\n\t>>> print(next(id))\n\tAAA00049\n\n\nThe identifier increments on the numeric sequence then the alpha:\n\n.. code-block:: python\n\n\t>>> id = MyIdentifier('AAA99991)\n\t>>> id\n\tMyIdentifier('AAB00013')\n\n\t>>> next(id)\n\t'AAB00021'\n\t>>> next(id)\n\t'AAB00039'\n\t>>> next(id)\n\t'AAB00047'\n\n\t>>> id = MyIdentifier('AAB99999')\n\t>>> id\n\tMyIdentifier('AAC00010')\n\t...\n\nSee ``getresults-receive`` for sample usage with ``settings`` and a ``History`` model.\n\nShort Identifiers\n-----------------\n\nCreates a small identifier that is almost unique, for example, across 25 Edc devices in a community. We use these as sample requisition identifiers that are transcribed manually onto a tube from the Edc screen in a household. Once the sample is received at the local lab it is allocated a laboratory-wide unique specimen identifier.\n\n.. code-block:: python\n\n    from edc_identifier import ShortIdentifier\n\n    >>> ShortIdentifier()\n    ShortIdentifier('46ZZ2')\n\nAdd a static prefix -- ``prefix(2) + identifier(5)``:\n\n.. code-block:: python\n\n\tfrom edc_identifier import ShortIdentifier\n\n\tclass MyIdentifier(ShortIdentifier):\n    \tprefix_pattern = r'^[0-9]{2}$'\n\n    >>> options = {'prefix': 22}\n    >>> id = MyIdentifier(options=options)\n\t>>> id\n\tMyIdentifier('22UYMBT')\n\t>>> next(id)\n\t'22KM84G'\n\nAdd a checkdigit -- ``prefix(2) + identifier(5) + checkdigit(1)``:\n\n.. code-block:: python\n\n\tfrom edc_identifier import ShortIdentifier\n\n\tclass MyIdentifier(ShortIdentifier):\n    \tprefix_pattern = r'^[0-9]{2}$'\n    \tcheckdigit_pattern = r'^[0-9]{1}$'\n\n    >>> options = {'prefix': 22}\n    >>> id = MyIdentifier(options=options)\n\t>>> id\n\tMyIdentifier('223GF8A3')\n\t>>> next(id)\n\t'22DXVW23'\n\nWe use this in edc-quota to get a confirmation code:\n\n.. code-block:: python\n\n\tfrom edc_identifier import ShortIdentifier\n\n\tclass ConfirmationCode(ShortIdentifier):\n\n\t    identifier_type = 'confirmation'\n\t    prefix_pattern = ''\n\n\t>>> code = ConfirmationCode()\n\t>>> print(code)\n\tCAT33\n\t>>> next(code)\n\t3FU7D\n\nAdd more to the prefix, such as device code and community code.\n\n.. code-block:: python\n\n\tfrom edc_identifier.short_identifier import ShortIdentifier\n\n\tclass RequisitionIdentifier(ShortIdentifier):\n\n\t\tidentifier_type = 'requisition'\n\t\tprefix_pattern = r'^[0-9]{4}$'\n\t\ttemplate = '{device_id}{community_id}{random_string}'\n\n\t\t@property\n\t\tdef options(self):\n\t\t\tif 'prefix' not in self._options:\n\t\t\t\tself._options.update(\n\t\t\t\t\t{'prefix': str(self._options.get('device_id')) + str(self._options.get('community_id'))})\n\t\t\treturn self._options\n\n    >>> options = {'device_id': 22, 'community_id': '12'}\n    >>> id = RequisitionIdentifier(options=options)\n\t>>> id\n\tRequisitionIdentifier('22126MZXD')\n\t>>> next(id)\n\t'2212Y899C'\n\n... if you prefer not to use the ``IdentifierHistory`` model, for example, if you are filling in a model field on ``save()``:\n\n.. code-block:: python\n\n\tfrom my_app.models import Requisition\n\n\tclass RequisitionIdentifier(ShortIdentifier):\n\n\t    identifier_type = 'requisition'\n\t    requisition_model = Requisition\n\n\t    def is_duplicate(self, identifier):\n\t        try:\n\t            self.requisition_model.get(requisition_identifier=identifier)\n\t            return True\n\t        except self.requisition_model.DoesNotExist:\n\t            pass\n\t        return False\n\n\t\tdef update_history(self):\n\t\t\tpass\n\n\nBatch Identifier\n----------------\n\nTo have an identifier prefixed by the current date stamp:\n\n\n.. code-block:: python\n\n\tfrom edc_identifier.batch_identifier import BatchIdentifier\n\n\t>>> datetime.today().strftime('%Y%m%d)\n\t20150817\n\t>>> id = BatchIdentifier()\n\t>>> id\n\tBatchIdentifier('201508170001')\n\t>>> next(id)\n\t'201508170002'\n\n\n.. |pypi| image:: https://img.shields.io/pypi/v/edc-identifier.svg\n    :target: https://pypi.python.org/pypi/edc-identifier\n\n.. |actions| image:: https://github.com/clinicedc/edc-identifier/workflows/build/badge.svg?branch=develop\n  :target: https://github.com/clinicedc/edc-identifier/actions?query=workflow:build\n\n.. |coverage| image:: https://coveralls.io/repos/github/clinicedc/edc-identifier/badge.svg?branch=develop\n    :target: https://coveralls.io/github/clinicedc/edc-identifier?branch=develop\n\n\n",
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